RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 VWC2LB2RUY7 222 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 NDUFS8O00217 210 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 BGLAPP02818 100 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 HLA-DOBP13765 273 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 THBS4P35443 961 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 NR4A2P43354 598 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 CAPZA2P47755 286 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 NPRL3Q12980 569 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 PMS2P3Q13401 168 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 TTMPQ5BVD1 217 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 MYPOPQ86VE0 399 aaPredicted RBP19.6■□□□□ 0.73
ACTN1-220ENST00000556433 RANBP3LQ86VV4 465 aaPredicted RBP19.6■□□□□ 0.73
ACTN1-220ENST00000556433 CCDC36Q8IYA8 594 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 C20orf196Q8IYI0 205 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 C10orf53Q8N6V4 93 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 NUP37Q8NFH4 326 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 CPPED1Q9BRF8 314 aaPredicted RBP19.6■□□□□ 0.73
ACTN1-220ENST00000556433 EMC6Q9BV81 110 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 BEX2Q9BXY8 128 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 RABEP2Q9H5N1 569 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 EVA1AQ9H8M9 152 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 ANGPT4Q9Y264 503 aa19.6■□□□□ 0.73
ACTN1-220ENST00000556433 LOC390937A0A1W2PQ73 354 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 ZNF503-AS2A6NEH8 195 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 ZNF99A8MXY4 864 aaPredicted RBP19.59■□□□□ 0.73
ACTN1-220ENST00000556433 SEC14L2O76054 403 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 MFN2O95140 757 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 FAM157CP0CG43 387 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 GZMKP49863 264 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 CDH12P55289 794 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 MDP1Q86V88 176 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 SCAIQ8N9R8 606 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 SMYD1Q8NB12 490 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 TXNDC15Q96J42 360 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 MOGAT1Q96PD6 335 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 RAB1BQ9H0U4 201 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 ZNF442Q9H7R0 627 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 TMEM160Q9NX00 188 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 LEF1Q9UJU2 399 aaPredicted RBP19.59■□□□□ 0.73
ACTN1-220ENST00000556433 USP22Q9UPT9 525 aa19.59■□□□□ 0.73
ACTN1-220ENST00000556433 SLC35F4A4IF30 521 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 ZNF16P17020 682 aaPredicted RBP19.58■□□□□ 0.72
ACTN1-220ENST00000556433 NPR2P20594 1047 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 POU3F1Q03052 451 aaPredicted RBP19.58■□□□□ 0.72
ACTN1-220ENST00000556433 C11orf65Q8NCR3 313 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 IL17RDQ8NFM7 739 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 THOC1Q96FV9 657 aaKnown RBP19.58■□□□□ 0.72
ACTN1-220ENST00000556433 LRR1Q96L50 414 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 MCHR1Q99705 422 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 MYOZ1Q9NP98 299 aaPredicted RBP19.58■□□□□ 0.72
ACTN1-220ENST00000556433 B3GAT2Q9NPZ5 323 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 MED29Q9NX70 200 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 MRPL39Q9NYK5 338 aaKnown RBP19.58■□□□□ 0.72
ACTN1-220ENST00000556433 NDUFAF1Q9Y375 327 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 NOX1Q9Y5S8 564 aa19.58■□□□□ 0.72
ACTN1-220ENST00000556433 IGHV2OR16-5A0A0B4J2B6 119 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 ZNF726A6NNF4 738 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 LRRN3E7EW58 273 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 hCG_2039718K7EN88 272 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 M0QX08 132 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 LMX1BO60663 402 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 HLA-HP01893 362 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 PPOXP50336 477 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 PUDPQ08623 228 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 CYP51A1Q16850 503 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 IQCCQ4KMZ1 466 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 SWT1Q5T5J6 900 aaKnown RBP19.57■□□□□ 0.72
ACTN1-220ENST00000556433 NHLRC1Q6VVB1 395 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 SPATA21Q7Z572 469 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 PTOV1Q86YD1 416 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 ANKRD27Q96NW4 1050 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 DOK1Q99704 481 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 TMEM43Q9BTV4 400 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 INTS9Q9NV88 658 aaKnown RBP19.57■□□□□ 0.72
ACTN1-220ENST00000556433 LPAR3Q9UBY5 353 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 FBXO9Q9UK97 447 aaPredicted RBP19.57■□□□□ 0.72
ACTN1-220ENST00000556433 POFUT2Q9Y2G5 429 aa19.57■□□□□ 0.72
ACTN1-220ENST00000556433 M0R3H8 397 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 PLPP3O14495 311 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 CD79AP11912 226 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 AHCYP23526 432 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 PCBP3P57721 371 aaKnown RBP19.56■□□□□ 0.72
ACTN1-220ENST00000556433 RBBP4Q09028 425 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 CAMK2DQ13557 499 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 DUSP7Q16829 419 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 PXKQ7Z7A4 578 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 DHDDSQ86SQ9 333 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 SVOPLQ8N434 492 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 OR6N1Q8NGY5 312 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 SHARPINQ9H0F6 387 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 B3GNT2Q9NY97 397 aa19.56■□□□□ 0.72
ACTN1-220ENST00000556433 FBN3Q75N90 2809 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 IGHV4-61A0A0C4DH41 118 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 LOC100289279A0A1B0GTE1 492 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 SH3PXD2BA1X283 911 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 FMO6PO60774 539 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 SERPINI2O75830 405 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 OPN1SWP03999 348 aa19.55■□□□□ 0.72
ACTN1-220ENST00000556433 APEHP13798 732 aaKnown RBP19.55■□□□□ 0.72
ACTN1-220ENST00000556433 MTPNP58546 118 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms