RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 WIPI2Q9Y4P8 454 aa11.89□□□□□ -0.51
ACTN1-219ENST00000556432 PRKDCP78527 4128 aaKnown RBP11.88□□□□□ -0.51
ACTN1-219ENST00000556432 A0A096LPI6 279 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 FSHBP01225 129 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 DBIP07108 87 aaKnown RBP11.88□□□□□ -0.51
ACTN1-219ENST00000556432 ZNF14P17017 642 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-219ENST00000556432 ANXA11P50995 505 aaKnown RBP11.88□□□□□ -0.51
ACTN1-219ENST00000556432 FXNQ16595 210 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 PCGF3Q3KNV8 242 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 ANXA8L1Q5VT79 327 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 HIST2H2BDQ6DRA6 164 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 RGS7BPQ6MZT1 257 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-219ENST00000556432 LEG1Q6P5S2 330 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 LRRC74BQ6ZQY2 392 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 RNF130Q86XS8 419 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 WDFY1Q8IWB7 410 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 C4orf33Q8N1A6 199 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 NOA1Q8NC60 698 aaKnown RBP11.88□□□□□ -0.51
ACTN1-219ENST00000556432 VPS37AQ8NEZ2 397 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 MFSD8Q8NHS3 518 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 RAB1CQ92928 201 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 LRRC58Q96CX6 371 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 GPA33Q99795 319 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 PKP2Q99959 881 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 SLITRK2Q9H156 845 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 OR51B6Q9H340 312 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 B3GAT2Q9NPZ5 323 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 B3GNT2Q9NY97 397 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 ARMCX1Q9P291 453 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 SEC14L4Q9UDX3 406 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 SLC7A8Q9UHI5 535 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 ZNF281Q9Y2X9 895 aa11.88□□□□□ -0.51
ACTN1-219ENST00000556432 PRSS51A0A1B0GVH4 220 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 C17orf100A8MU93 164 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 NPHS1O60500 1241 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 FAM157BP0CG42 384 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 B4GALT1P15291 398 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 KRT4P19013 534 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-219ENST00000556432 RPS4Y1P22090 263 aaKnown RBP11.87□□□□□ -0.51
ACTN1-219ENST00000556432 PCGF2P35227 344 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 AQP5P55064 265 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 KLF3P57682 345 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-219ENST00000556432 RAB39AQ14964 217 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 HFEQ30201 348 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 MMEL1Q495T6 779 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 LIN52Q52LA3 116 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 USP51Q70EK9 711 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 ICA1LQ8NDH6 482 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 OR8J2Q8NGG1 315 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 STK35Q8TDR2 534 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 ST7LQ8TDW4 575 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 C16orf45Q96MC5 204 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-219ENST00000556432 CCT8L2Q96SF2 557 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 ZNF69Q9UC07 566 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 NUP50Q9UKX7 468 aa11.87□□□□□ -0.51
ACTN1-219ENST00000556432 WNK1Q9H4A3 2382 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 CDHR4A6H8M9 788 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 AIM2O14862 343 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 CLPTM1O96005 669 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 RNASE1P07998 156 aaKnown RBP11.86□□□□□ -0.51
ACTN1-219ENST00000556432 OMGP23515 440 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 ALDH3A1P30838 453 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 ATP4BP51164 291 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 RAB1AP62820 205 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 EMX2Q04743 252 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 TSTQ16762 297 aaKnown RBP11.86□□□□□ -0.51
ACTN1-219ENST00000556432 PHYHD1Q5SRE7 291 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 ZNF836Q6ZNA1 936 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 C17orf107Q6ZR85 190 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 SPATC1Q76KD6 591 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 VRK2Q86Y07 508 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 TMEM123Q8N131 208 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 OR52P1PQ8NH57 321 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 PPP1R36Q96LQ0 422 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 TSPAN32Q96QS1 320 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 MECRQ9BV79 373 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 SAP30LQ9HAJ7 183 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 CACYBPQ9HB71 228 aaKnown RBP11.86□□□□□ -0.51
ACTN1-219ENST00000556432 SLCO1C1Q9NYB5 712 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 B3GAT1Q9P2W7 334 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 FBXL3Q9UKT7 428 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 CACNG2Q9Y698 323 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 DSPPQ9NZW4 1301 aa11.86□□□□□ -0.51
ACTN1-219ENST00000556432 ARHGAP32A7KAX9 2087 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 SLC22A23A1A5C7 686 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 FTCDNL1E5RQL4 147 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 M0R082 166 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 NPIPB7O75200 414 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 UBL3O95164 117 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 KNG1P01042 644 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 C1QCP02747 245 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 MT-ND5P03915 603 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 LCKP06239 509 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 PRG2P13727 222 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 NQO1P15559 274 aaKnown RBP11.85□□□□□ -0.51
ACTN1-219ENST00000556432 DRD4P21917 467 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 CBLP22681 906 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 GCH1P30793 250 aa11.85□□□□□ -0.51
ACTN1-219ENST00000556432 ACAA2P42765 397 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms