RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TXNDC15Q96J42 360 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 OR52B2Q96RD2 323 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 EMC6Q9BV81 110 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 C12orf10Q9HB07 376 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 A4GALTQ9NPC4 353 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 KLHL14Q9P2G3 628 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 FBXO9Q9UK97 447 aaPredicted RBP12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 IFT52Q9Y366 437 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ARHGAP32A7KAX9 2087 aa12.34□□□□□ -0.43
CHMP4BP1-201ENST00000556017 AIM2O14862 343 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 BGLAPP02818 100 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 CBLP22681 906 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 CFPP27918 469 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 EVX1P49640 407 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 AQP5P55064 265 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 RINLQ6ZS11 566 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 H1FNTQ75WM6 255 aaPredicted RBP12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 GPR137CQ8N3F9 429 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ADPRHL1Q8NDY3 354 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 PIK3C3Q8NEB9 887 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 IL17RDQ8NFM7 739 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 FGFBP3Q8TAT2 258 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 MOGAT1Q96PD6 335 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 SLC25A37Q9NYZ2 338 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ZIM2Q9NZV7 527 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ZNF232Q9UNY5 417 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 USP22Q9UPT9 525 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 CMAHPQ9Y471 501 aa12.33□□□□□ -0.44
CHMP4BP1-201ENST00000556017 LRRN3E7EW58 273 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 M0R3G1 203 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 WIPF1O43516 503 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 SYNGR3O43761 229 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 RP2O75695 350 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 IDO1P14902 403 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 TCN1P20061 433 aaPredicted RBP12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 LMO4P61968 165 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 IL1RL1Q01638 556 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 MFSD13AQ14CX5 517 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 MAD2L1BPQ15013 274 aaPredicted RBP12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 MSANTD1Q6ZTZ1 278 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 CCDC36Q8IYA8 594 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 SLC38A4Q969I6 547 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ZBTB18Q99592 522 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 PLA2G12AQ9BZM1 189 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 DYNLRB1Q9NP97 96 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 SLC52A3Q9NQ40 469 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 MED29Q9NX70 200 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 SLAMF8Q9P0V8 285 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 SPEF1Q9Y4P9 236 aa12.32□□□□□ -0.44
CHMP4BP1-201ENST00000556017 TRAV36DV7A0A075B6V5 113 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 A0A087WUJ7 227 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 B4DSR2 109 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 CLIC1O00299 241 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 OR2T1O43869 369 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 AVPP01185 164 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 KITP10721 976 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ETS2P15036 469 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 PRKAR1BP31321 381 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 GLRXP35754 106 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 SRP14P37108 136 aaKnown RBP12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ALDH3B1P43353 468 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 POLR2JP52435 117 aaKnown RBP12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 RUNX1T1Q06455 604 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 PIGFQ07326 219 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 CARD17Q5XLA6 110 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 SLC2A7Q6PXP3 512 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 WDR88Q6ZMY6 472 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 FUNDC1Q8IVP5 155 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ITCHQ96J02 903 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 LRR1Q96L50 414 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 SYT3Q9BQG1 590 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 KCNK9Q9NPC2 374 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 THAP1Q9NVV9 213 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 REV1Q9UBZ9 1251 aa12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 V9GYY5 206 aaPredicted RBP12.31□□□□□ -0.44
CHMP4BP1-201ENST00000556017 TRBV5-3A0A0A0MS03 114 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 TRPC5OSA6NMA1 111 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 M0R233 179 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ARAFP10398 606 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 B4GALT1P15291 398 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 CAPZA2P47755 286 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 GIPRP48546 466 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 C1DQ13901 141 aaKnown RBP12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ALG10BQ5I7T1 473 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 DHRS4L2Q6PKH6 230 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 C5orf46Q6UWT4 87 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 NET1Q7Z628 596 aaPredicted RBP12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 OR6S1Q8NH40 331 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 BBS10Q8TAM1 723 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 TMEM186Q96B77 213 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 PAIP2Q9BPZ3 127 aaKnown RBP12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 IKZF5Q9H5V7 419 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 NARFLQ9H6Q4 476 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 METTL17Q9H7H0 456 aaPredicted RBP12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 ZNF275Q9NSD4 429 aaPredicted RBP12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 HIF1ANQ9NWT6 349 aa12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 THUMPD1Q9NXG2 353 aaKnown RBP12.3□□□□□ -0.44
CHMP4BP1-201ENST00000556017 FZR1Q9UM11 496 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms