RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GTF2IRD2BQ6EKJ0 949 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 KRT80Q6KB66 452 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 PCSK4Q6UW60 755 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 GFRALQ6UXV0 394 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 PTCHD4Q6ZW05 846 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 USP51Q70EK9 711 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 SLC35D2Q76EJ3 337 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 HDDC2Q7Z4H3 204 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 THAP5Q7Z6K1 395 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 GTF2IRD2Q86UP8 949 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 JAZF1Q86VZ6 243 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 OR9K2Q8NGE7 335 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 OR5M9Q8NGP3 310 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 TRUB1Q8WWH5 349 aaKnown RBP9.85□□□□□ -0.83
TMEM260-208ENST00000555905 TSPAN32Q96QS1 320 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 TMUB1Q9BVT8 246 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 TXNIPQ9H3M7 391 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 KLHL13Q9P2N7 655 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 B3GAT1Q9P2W7 334 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 KLHL21Q9UJP4 597 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 ADAM18Q9Y3Q7 739 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 PRRC2CQ9Y520 2896 aaKnown RBP9.85□□□□□ -0.83
TMEM260-208ENST00000555905 TLN1Q9Y490 2541 aaKnown RBP9.84□□□□□ -0.83
TMEM260-208ENST00000555905 TEX13CA0A0J9YWL9 993 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 FIGNL2A6NMB9 653 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 M0R3G1 203 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 SURF4O15260 269 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 RAMP1O60894 148 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 TXNDC12O95881 172 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 HLA-DOBP13765 273 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 EDN3P14138 238 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 GABRA1P14867 456 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 IFNGR1P15260 489 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF3P17036 446 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 KLK2P20151 261 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 PAICSP22234 425 aaKnown RBP9.84□□□□□ -0.83
TMEM260-208ENST00000555905 ACVR2AP27037 513 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 PTGER4P35408 488 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 ACVR1BP36896 505 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 MLLT10P55197 1068 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 RBPJQ06330 500 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 RASGEF1BQ0VAM2 473 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 NFATC3Q12968 1075 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 KRR1Q13601 381 aaKnown RBP9.84□□□□□ -0.83
TMEM260-208ENST00000555905 SLC17A1Q14916 467 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 RNPS1Q15287 305 aaKnown RBP9.84□□□□□ -0.83
TMEM260-208ENST00000555905 EEF1A1P5Q5VTE0 462 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 ABLIM2Q6H8Q1 611 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF585AQ6P3V2 769 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 FAM122BQ7Z309 247 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 P4HA3Q7Z4N8 544 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 ADCK1Q86TW2 530 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 CHERPQ8IWX8 916 aaKnown RBP9.84□□□□□ -0.83
TMEM260-208ENST00000555905 MCEMP1Q8IX19 187 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 ARIH2OSQ8N7S6 290 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 LSM14AQ8ND56 463 aaKnown RBP9.84□□□□□ -0.83
TMEM260-208ENST00000555905 OR8J1Q8NGP2 316 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 FNDC9Q8TBE3 224 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 RNF128Q8TEB7 428 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 Q96M85 177 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 TRIB1Q96RU8 372 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 REPIN1Q9BWE0 567 aaKnown RBP9.84□□□□□ -0.83
TMEM260-208ENST00000555905 CMC2Q9NRP2 79 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 RASSF1Q9NS23 344 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 PNPLA3Q9NST1 481 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 EMC3Q9P0I2 261 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 KLHL9Q9P2J3 617 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF346Q9UL40 294 aaKnown RBP9.84□□□□□ -0.83
TMEM260-208ENST00000555905 RNF6Q9Y252 685 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 LRCH1Q9Y2L9 728 aa9.84□□□□□ -0.83
TMEM260-208ENST00000555905 USP24Q9UPU5 2620 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 ZNF726A6NNF4 738 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 M0R129 80 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 GPR171O14626 319 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 PRRG2O14669 202 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 ZNHIT1O43257 154 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 TLX2O43763 284 aaPredicted RBP9.83□□□□□ -0.84
TMEM260-208ENST00000555905 AKAP8O43823 692 aaKnown RBP9.83□□□□□ -0.84
TMEM260-208ENST00000555905 PRKYO43930 277 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 WDR1O75083 606 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 RENP00797 406 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 TPOP07202 933 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 HOXD4P09016 255 aaPredicted RBP9.83□□□□□ -0.84
TMEM260-208ENST00000555905 HIST1H1CP16403 213 aaKnown RBP9.83□□□□□ -0.84
TMEM260-208ENST00000555905 SLC16A1P53985 500 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 BIDP55957 195 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 ISL1P61371 349 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 SNRPGP62308 76 aaKnown RBP9.83□□□□□ -0.84
TMEM260-208ENST00000555905 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.83□□□□□ -0.84
TMEM260-208ENST00000555905 PDK3Q15120 406 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 CREB3L2Q70SY1 520 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 FGD2Q7Z6J4 655 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 CCDC71Q8IV32 467 aaPredicted RBP9.83□□□□□ -0.84
TMEM260-208ENST00000555905 ENTHD1Q8IYW4 607 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 MARVELD2Q8N4S9 558 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 TCEANCQ8N8B7 351 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 OR52E2Q8NGJ4 325 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 OR4K13Q8NH42 304 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 RHOXF1Q8NHV9 184 aa9.83□□□□□ -0.84
TMEM260-208ENST00000555905 ZNF519Q8TB69 540 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms