RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 TBRG1Q3YBR2 411 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 ZNF672Q499Z4 452 aaPredicted RBP11.96□□□□□ -0.49
SNX6-203ENST00000555416 ZNF611Q8N823 705 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 WFDC11Q8NEX6 87 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 BOD1Q96IK1 185 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 HSH2DQ96JZ2 352 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 LRRC37BQ96QE4 947 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 CCL19Q99731 98 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 FKRPQ9H9S5 495 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 SPAG4Q9NPE6 437 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 NGBQ9NPG2 151 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 NANSQ9NR45 359 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 BEX4Q9NWD9 120 aaPredicted RBP11.96□□□□□ -0.49
SNX6-203ENST00000555416 ADA2Q9NZK5 511 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 TAGLN3Q9UI15 199 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 ARID1AO14497 2285 aa11.96□□□□□ -0.49
SNX6-203ENST00000555416 RPL36A-HNRNPH2H7BZ11 118 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 M0R3G1 203 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 OR7A10O76100 309 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 MT-ND1P03886 318 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 IFNGR1P15260 489 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 TCN1P20061 433 aaPredicted RBP11.95□□□□□ -0.5
SNX6-203ENST00000555416 CD40P25942 277 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 CAMK2DQ13557 499 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 CEACAM16Q2WEN9 425 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 PGGHGQ32M88 737 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 B3GLCTQ6Y288 498 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 C20orf204Q6ZNR8 217 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 PXKQ7Z7A4 578 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 C20orf196Q8IYI0 205 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 C17orf78Q8N4C9 275 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 FITM2Q8N6M3 262 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 ANKS4BQ8N8V4 417 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 TMEM239Q8WW34 195 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 PRRC1Q96M27 445 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 SLC19A3Q9BZV2 496 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 POLR2J2Q9GZM3 115 aaKnown RBP11.95□□□□□ -0.5
SNX6-203ENST00000555416 POLR2J3Q9H1A7 115 aaKnown RBP11.95□□□□□ -0.5
SNX6-203ENST00000555416 SEC61A2Q9H9S3 476 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 CRLF2Q9HC73 371 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 CD300AQ9UGN4 299 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 EDARQ9UNE0 448 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 NOX1Q9Y5S8 564 aa11.95□□□□□ -0.5
SNX6-203ENST00000555416 PLCE1Q9P212 2302 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 E7EQL1 145 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 DANCRP0C864 163 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 UMPSP11172 480 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 RBM34P42696 430 aaKnown RBP11.94□□□□□ -0.5
SNX6-203ENST00000555416 BIDP55957 195 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 TGFBR3Q03167 851 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 ZP4Q12836 540 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 MELKQ14680 651 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 IFI44LQ53G44 452 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 GLYATQ6IB77 296 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 HMBOX1Q6NT76 420 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 FKBP9P1Q75LS8 142 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 ABHD12BQ7Z5M8 362 aaPredicted RBP11.94□□□□□ -0.5
SNX6-203ENST00000555416 MYPOPQ86VE0 399 aaPredicted RBP11.94□□□□□ -0.5
SNX6-203ENST00000555416 TGIF2LYQ8IUE0 185 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 GPR137CQ8N3F9 429 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 MOSPD2Q8NHP6 518 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 GEMIN6Q8WXD5 167 aaKnown RBP11.94□□□□□ -0.5
SNX6-203ENST00000555416 LZICQ8WZA0 190 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 FAM162AQ96A26 154 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 SGTBQ96EQ0 304 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 PERPQ96FX8 193 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 PIP5K1AQ99755 562 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 ZNF229Q9UJW7 825 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 AMDHD2Q9Y303 409 aa11.94□□□□□ -0.5
SNX6-203ENST00000555416 FLNAP21333 2647 aaKnown RBP11.94□□□□□ -0.5
SNX6-203ENST00000555416 OR6C65A6NJZ3 312 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 BLOC1S5-TXNDC5H3BN57 136 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 RNF13O43567 381 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 SMPD2O60906 423 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 DCTN3O75935 186 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 FAM107AO95990 144 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 CD8AP01732 235 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 IFNW1P05000 195 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 F13BP05160 661 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 THRBP10828 461 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 MAKP20794 623 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 AQP2P41181 271 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 CDH11P55287 796 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 PRPS1P60891 318 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 NKX6-1P78426 367 aaPredicted RBP11.93□□□□□ -0.5
SNX6-203ENST00000555416 RUNX1T1Q06455 604 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 RPL18Q07020 188 aaKnown RBP11.93□□□□□ -0.5
SNX6-203ENST00000555416 FHL1Q13642 323 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 LAPTM4AQ15012 233 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 FXNQ16595 210 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 ANKRD16Q6P6B7 361 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 TBPL2Q6SJ96 375 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 TMEM108Q6UXF1 575 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 SLC35D2Q76EJ3 337 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 NANOGNBQ7Z5D8 188 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 OFCC1Q8IZS5 231 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 PGAM4Q8N0Y7 254 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 PIK3C3Q8NEB9 887 aa11.93□□□□□ -0.5
SNX6-203ENST00000555416 SMAP2Q8WU79 429 aaPredicted RBP11.93□□□□□ -0.5
SNX6-203ENST00000555416 PIGTQ969N2 578 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms