RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TFAP2EQ6VUC0 442 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 DPY19L2P2Q6ZN68 376 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 CNEP1R1Q8N9A8 125 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 RELL2Q8NC24 303 aaPredicted RBP11.24□□□□□ -0.61
SYNE2-219ENST00000555323 OR6X1Q8NH79 312 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF775Q96BV0 537 aaPredicted RBP11.24□□□□□ -0.61
SYNE2-219ENST00000555323 TXNDC15Q96J42 360 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 ADAD1Q96M93 576 aaKnown RBP11.24□□□□□ -0.61
SYNE2-219ENST00000555323 OR52D1Q9H346 318 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 TXNIPQ9H3M7 391 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 DCLRE1BQ9H816 532 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 NRIP3Q9NQ35 241 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 REV1Q9UBZ9 1251 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 OAZ3Q9UMX2 235 aa11.24□□□□□ -0.61
SYNE2-219ENST00000555323 A0A1W2PRG6 482 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 SLC35F4A4IF30 521 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 OR6C65A6NJZ3 312 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 CENPBD1B2RD01 187 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 BCL10O95999 233 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 CD14P08571 375 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 APEHP13798 732 aaKnown RBP11.23□□□□□ -0.61
SYNE2-219ENST00000555323 IFNGR1P15260 489 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF23P17027 643 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 BMP5P22003 454 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 DAPP51397 102 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 CLDN17P56750 224 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 CTXN1P60606 82 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 PPP2R2BQ00005 443 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 POU3F1Q03052 451 aaPredicted RBP11.23□□□□□ -0.61
SYNE2-219ENST00000555323 CDSNQ15517 529 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 ARMC4Q5T2S8 1044 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 KDM4DQ6B0I6 523 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 KLHL17Q6TDP4 642 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 THSD4Q6ZMP0 1018 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF620Q6ZNG0 422 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 SLC35D2Q76EJ3 337 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 AAED1Q7RTV5 226 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 FAM122BQ7Z309 247 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 STK32CQ86UX6 486 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 KIF18BQ86Y91 864 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 PARP8Q8N3A8 854 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF610Q8N9Z0 462 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 CA5BP1Q8WTZ4 195 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 GTPBP3Q969Y2 492 aaKnown RBP11.23□□□□□ -0.61
SYNE2-219ENST00000555323 LRR1Q96L50 414 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 LINC00470Q9BZP3 86 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 UCK2Q9BZX2 261 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 MED29Q9NX70 200 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 STX18Q9P2W9 335 aaKnown RBP11.23□□□□□ -0.61
SYNE2-219ENST00000555323 PROCRQ9UNN8 238 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 CDH10Q9Y6N8 788 aa11.23□□□□□ -0.61
SYNE2-219ENST00000555323 MCIDASD6RGH6 385 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 IMPA2O14732 288 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ARPC3O15145 178 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 AKAP8O43823 692 aaKnown RBP11.22□□□□□ -0.61
SYNE2-219ENST00000555323 IDH3BO43837 385 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 AGFG2O95081 481 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 CLDN14O95500 239 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 BAG2O95816 211 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 TXNDC12O95881 172 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 OSMP13725 252 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ANPEPP15144 967 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 EDNRAP25101 427 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 SELENOPP49908 381 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 DAP3P51398 398 aaKnown RBP11.22□□□□□ -0.61
SYNE2-219ENST00000555323 SIRPAP78324 504 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ACKR1Q16570 336 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 FBXW9Q5XUX1 488 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ANKRD34AQ69YU3 496 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF474Q6S9Z5 364 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-219ENST00000555323 BEND4Q6ZU67 534 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 TMEM123Q8N131 208 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ATG16L2Q8NAA4 619 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ICA1LQ8NDH6 482 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 SSC4DQ8WTU2 575 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ASB10Q8WXI3 467 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 APH1AQ96BI3 265 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 SLC25A44Q96H78 314 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-219ENST00000555323 OR2M2Q96R28 347 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 PCNX1Q96RV3 2341 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 EMC6Q9BV81 110 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 MRPL13Q9BYD1 178 aaKnown RBP11.22□□□□□ -0.61
SYNE2-219ENST00000555323 NDEL1Q9GZM8 345 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF556Q9HAH1 456 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 USE1Q9NZ43 259 aa11.22□□□□□ -0.61
SYNE2-219ENST00000555323 FOXD3Q9UJU5 478 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF346Q9UL40 294 aaKnown RBP11.22□□□□□ -0.61
SYNE2-219ENST00000555323 INTS1Q8N201 2190 aaKnown RBP11.21□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF726A6NNF4 738 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 RPL36A-HNRNPH2H7BZ11 118 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 PDLIM1O00151 329 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 BHLHE40O14503 412 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 AHCYL1O43865 530 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 MGRN1O60291 552 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 RNF224P0DH78 156 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 SLC6A6P31641 620 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 RPL4P36578 427 aaKnown RBP11.21□□□□□ -0.61
SYNE2-219ENST00000555323 BIDP55957 195 aa11.21□□□□□ -0.61
SYNE2-219ENST00000555323 RPL27P61353 136 aaKnown RBP11.21□□□□□ -0.61
SYNE2-219ENST00000555323 IL1RL1Q01638 556 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms