RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 VDAC2P45880 294 aaPredicted RBP3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 YAP1P46937 504 aaKnown RBP3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 BST1Q10588 318 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 PSG7Q13046 419 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 NRF1Q16656 503 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 LRRC31Q6UY01 552 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 LRRC74BQ6ZQY2 392 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 ZNF546Q86UE3 836 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 DCAF4L2Q8NA75 395 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 C20orf203Q8NBC4 194 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 FAM151AQ8WW52 585 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 TUBGCP3Q96CW5 907 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 PLEKHA8Q96JA3 519 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 FMO2Q99518 471 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 METTL7AQ9H8H3 244 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 GLRX2Q9NS18 164 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 MTRF1LQ9UGC7 380 aaKnown RBP3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 RABL2BQ9UNT1 228 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 ITSN2Q9NZM3 1697 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 CHD4Q14839 1912 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 FAM135AQ9P2D6 1515 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 CAMSAP2Q08AD1 1489 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 SHANK2Q9UPX8 1470 aa3.73□□□□□ -1.81
CKS1BP1-201ENST00000555221 ARHGEF5Q12774 1597 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 TTC37Q6PGP7 1564 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 ERBINQ96RT1 1412 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 ANKRD50Q9ULJ7 1429 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 YEATS2Q9ULM3 1422 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 XKRY2A2RUG3 117 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 KLF8O95600 359 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 MMP1P03956 469 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 FGF1P05230 155 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 DUX4L4P0CJ87 422 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 MCF2P10911 925 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 FMO3P31513 532 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 FDFT1P37268 417 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 CRYBB2P43320 205 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 TPMTP51580 245 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 ZNF77Q15935 545 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 KCTD21Q4G0X4 260 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 PAGE3Q5JUK9 113 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 GPR157Q5UAW9 335 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 TPRX1Q8N7U7 411 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 LINC01555Q8NAE3 123 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 FAM110BQ8TC76 370 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 ACOT11Q8WXI4 607 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 STMN2Q93045 179 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 ELSPBP1Q96BH3 223 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 PANX2Q96RD6 677 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 MFFQ9GZY8 342 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 RNF167Q9H6Y7 350 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 MRPL47Q9HD33 250 aaKnown RBP3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 QPCTLQ9NXS2 382 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 PREX2Q70Z35 1606 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 TCOF1Q13428 1488 aaKnown RBP3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 KDM5CP41229 1560 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 MED1Q15648 1581 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 REREQ9P2R6 1566 aa3.72□□□□□ -1.81
CKS1BP1-201ENST00000555221 ABCC5O15440 1437 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 DAPK1P53355 1430 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 UHRF1BP1Q6BDS2 1440 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 RRBP1Q9P2E9 1410 aaKnown RBP3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 ABCC1P33527 1531 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 ATP7AQ04656 1500 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 DUOX2Q9NRD8 1548 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 IGKV6D-41A0A0C4DH26 115 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 TRIM64CA6NLI5 447 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 CCDC169A6NNP5 214 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 C12orf71A8MTZ7 269 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 H0Y9J4 135 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 NPIPB7O75200 414 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR7A10O76100 309 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 VHLP40337 213 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 BST2Q10589 180 aaKnown RBP3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 GK3PQ14409 553 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 CYTH1Q15438 398 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 PAQR7Q86WK9 346 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 SLC22A9Q8IVM8 553 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 CNPY4Q8N129 248 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 RNF175Q8N4F7 328 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR1L6Q8NGR2 347 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 AKR7LQ8NHP1 331 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 FANK1Q8TC84 345 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 SLC2A14Q8TDB8 520 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 ARPC1AQ92747 370 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 RPUSD4Q96CM3 377 aaKnown RBP3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 FCRL1Q96LA6 429 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 PLIN2Q99541 437 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 TMEM246Q9BRR3 403 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 PELOQ9BRX2 385 aaKnown RBP3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 RIOK2Q9BVS4 552 aaKnown RBP3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR11A1Q9GZK7 315 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 SIAEQ9HAT2 523 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 MMP26Q9NRE1 261 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 ETNK2Q9NVF9 386 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 SLC2A8Q9NY64 477 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 ANAPC11Q9NYG5 84 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 MMP17Q9ULZ9 603 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 NUP155O75694 1391 aa3.71□□□□□ -1.82
CKS1BP1-201ENST00000555221 PTPRMP28827 1452 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms