RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 HOXD1Q9GZZ0 328 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 TIGARQ9NQ88 270 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 DAPL1A0PJW8 107 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 C12orf71A8MTZ7 269 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 GTPBP1O00178 669 aaKnown RBP15.72■□□□□ 0.11
SHOX-204ENST00000554971 SLC6A6P31641 620 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 PYDC2Q56P42 97 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 ZMAT1Q5H9K5 638 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 LCN1P1Q5VSP4 162 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 FIGNL1Q6PIW4 674 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 RDH10Q8IZV5 341 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 CELF2-AS1Q8N7Q2 184 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 PTP4A1Q93096 173 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 TP53INP1Q96A56 240 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 OTULINQ96BN8 352 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 LCORQ96JN0 433 aaPredicted RBP15.72■□□□□ 0.11
SHOX-204ENST00000554971 TEAD3Q99594 435 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 ATF6BQ99941 703 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 PPP1R3EQ9H7J1 279 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 C20orf141Q9NUB4 165 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 FBXO34Q9NWN3 711 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 PCNX3Q9H6A9 2034 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 PLPP2O43688 288 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 SAGP10523 405 aaPredicted RBP15.72■□□□□ 0.11
SHOX-204ENST00000554971 ZNF3P17036 446 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 ABCD3P28288 659 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 CD96P40200 585 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 CD79BP40259 229 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 ZNF791Q3KP31 576 aaPredicted RBP15.72■□□□□ 0.11
SHOX-204ENST00000554971 ARHGAP11AQ6P4F7 1023 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 LINC00114Q6XXX2 140 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 KLBQ86Z14 1044 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 PRR22Q8IZ63 422 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 RBMXL3Q8N7X1 1067 aaKnown RBP15.72■□□□□ 0.11
SHOX-204ENST00000554971 SLC37A3Q8NCC5 494 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 PFN4Q8NHR9 129 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 HAS2Q92819 552 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 ZC3HAV1LQ96H79 300 aaKnown RBP15.72■□□□□ 0.11
SHOX-204ENST00000554971 BBC3Q96PG8 261 aaPredicted RBP15.72■□□□□ 0.11
SHOX-204ENST00000554971 SIGLEC12Q96PQ1 595 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 UBL7Q96S82 380 aaPredicted RBP15.72■□□□□ 0.11
SHOX-204ENST00000554971 TMED9Q9BVK6 235 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 HDHD5Q9BXW7 423 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 RNF32Q9H0A6 362 aa15.72■□□□□ 0.11
SHOX-204ENST00000554971 FREM3P0C091 2139 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 GXYLT2A0PJZ3 443 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 CCDC182A6NF36 153 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 FRG2CA6NGY1 282 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 HMX3A6NHT5 357 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 NEURL1O76050 574 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 TGM4P49221 684 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 SSR4P51571 173 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 VASNQ6EMK4 673 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 MZT2BQ6NZ67 158 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 ULK3Q6PHR2 472 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 ASB18Q6ZVZ8 466 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 TEX19Q8NA77 164 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 SYT14Q8NB59 555 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 KISS1RQ969F8 398 aaPredicted RBP15.71■□□□□ 0.11
SHOX-204ENST00000554971 RERGLQ9H628 205 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 ZNF221Q9UK13 617 aa15.71■□□□□ 0.11
SHOX-204ENST00000554971 A0A1B0GWA3 101 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 TO15178 435 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 DDOSTP39656 456 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 ACAA2P42765 397 aaKnown RBP15.7■□□□□ 0.1
SHOX-204ENST00000554971 TNFSF10P50591 281 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 HLA-DQA1Q5Y7H0 255 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 SPINK14Q6IE38 97 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 TMEM91Q6ZNR0 172 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 MDGA2Q7Z553 956 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 MS4A15Q8N5U1 240 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 C19orf18Q8NEA5 215 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 OR6F1Q8NGZ6 308 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 SNX18Q96RF0 628 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 MEPEQ9NQ76 525 aaPredicted RBP15.7■□□□□ 0.1
SHOX-204ENST00000554971 COMMD3Q9UBI1 195 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 IL20RAQ9UHF4 553 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 NOX1Q9Y5S8 564 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 DNAJC13O75165 2243 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 ZNF407Q9C0G0 2248 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 OR5H15A6NDH6 313 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 FAM183AA6NL82 134 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 NPIPB9F8W1W9 429 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 PPM1BO75688 479 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 SBK2P0C263 348 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 SLC2A5P22732 501 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 DCAF7P61962 342 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 FGFBP1Q14512 234 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 ZNF362Q5T0B9 420 aaPredicted RBP15.7■□□□□ 0.1
SHOX-204ENST00000554971 RSBN1Q5VWQ0 802 aaPredicted RBP15.7■□□□□ 0.1
SHOX-204ENST00000554971 PAMR1Q6UXH9 720 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 OAFQ86UD1 273 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 ZNF440Q8IYI8 595 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 ZFP41Q8N8Y5 198 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 OR5W2Q8NH69 310 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 CNOT9Q92600 299 aaKnown RBP15.7■□□□□ 0.1
SHOX-204ENST00000554971 WBP1Q96G27 269 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 TIMP4Q99727 224 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 SLC25A18Q9H1K4 315 aa15.7■□□□□ 0.1
SHOX-204ENST00000554971 Q9N2J8 555 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms