RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 RPL38P63173 70 aaKnown RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 CSNK2A1P68400 391 aaPredicted RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 BNC1Q01954 994 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 PLOD1Q02809 727 aaPredicted RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 TNK1Q13470 666 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 GTDC1Q4AE62 458 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 GGTA1PQ4G0N0 100 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 CARD16Q5EG05 197 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 SPANXN4Q5MJ08 99 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 TMEM215Q68D42 235 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 TMEM26Q6ZUK4 368 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 VTCN1Q7Z7D3 282 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 TMEM25Q86YD3 366 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 LIX1Q8N485 282 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 KRTCAP2Q8N6L1 136 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 FAM86B1Q8N7N1 296 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 BCORP1Q8N888 145 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 ASCC1Q8N9N2 400 aaKnown RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 C17orf47Q8NEP4 570 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 CSNK2A3Q8NEV1 391 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 OR8J3Q8NGG0 315 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 OR52E4Q8NGH9 312 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 CDC26Q8NHZ8 85 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 FAM81AQ8TBF8 368 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 PPWD1Q96BP3 646 aaKnown RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 HAVCR1Q96D42 359 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 RMND5BQ96G75 393 aaPredicted RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 FCRL1Q96LA6 429 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 ZNF641Q96N77 438 aaPredicted RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 SH3GL3Q99963 347 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 CHID1Q9BWS9 393 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 NMNAT2Q9BZQ4 307 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 DPY30Q9C005 99 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 EGLN1Q9GZT9 426 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 DNTTIP1Q9H147 329 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 RHBGQ9H310 441 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 RGCCQ9H4X1 137 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 IKZF5Q9H5V7 419 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 CLMPQ9H6B4 373 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 AUNIPQ9H7T9 357 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 WDR76Q9H967 626 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 LRTM1Q9HBL6 345 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 EQTNQ9NQ60 294 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 RHCGQ9UBD6 479 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 OPTCQ9UBM4 332 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 ZNF490Q9ULM2 529 aaPredicted RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 FOXA2Q9Y261 457 aaPredicted RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 EIF3LQ9Y262 564 aaKnown RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 TP53BP1Q12888 1972 aaPredicted RBP4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 PCDH15Q96QU1 1955 aa4.67□□□□□ -1.66
MTHFD1-206ENST00000554353 TMEM131Q92545 1883 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 GOLGA4Q13439 2230 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 NUMA1Q14980 2115 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 A0A096LPI6 279 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 A0A1B0GVG6 124 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 TSPAN11A1L157 253 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 C12orf71A8MTZ7 269 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 FAM220BPB1ANY3 271 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 SLC16A5O15375 505 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 CLOCKO15516 846 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 NDUFS4O43181 175 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 SPINT2O43291 252 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 ZNF264O43296 627 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 FCGR3BO75015 233 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 CBR3O75828 277 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 CLPXO76031 633 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 CLDN9O95484 217 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 SNAP29O95721 258 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 CLIC3O95833 236 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 IL6P05231 212 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 PROS1P07225 676 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 C8GP07360 202 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 ANXA5P08758 320 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 SPP1P10451 314 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 CEACAM1P13688 526 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 ATP1B2P14415 290 aaPredicted RBP4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 PAICSP22234 425 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 P2RY2P41231 377 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 MAGEB1P43366 347 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 CDK9P50750 372 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 ATP12AP54707 1039 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 LINC00205P59089 165 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 PFN3P60673 137 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 B2MP61769 119 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 RPS14P62263 151 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 RASGEF1BQ0VAM2 473 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 MAD2L1Q13257 205 aaPredicted RBP4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 DYNC1I2Q13409 638 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 USF2Q15853 346 aaPredicted RBP4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 EXOC3L2Q2M3D2 409 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 TTLL9Q3SXZ7 439 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 FAM174BQ3ZCQ3 159 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 HIKESHIQ53FT3 197 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 ZNF311Q5JNZ3 666 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 EOGTQ5NDL2 527 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 PRAMEF5Q5TYX0 476 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 FAM69BQ5VUD6 431 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 PRAMEF6Q5VXH4 476 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 PRAMEF7Q5VXH5 474 aa4.66□□□□□ -1.66
MTHFD1-206ENST00000554353 ZDHHC20Q5W0Z9 365 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms