RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 EMC8O43402 210 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 GPRIN2O60269 458 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 SC5DO75845 299 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 RGS11O94810 467 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 TNFSF15O95150 251 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 LALBAP00709 142 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 GUSBP08236 651 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 ADRA2AP08913 450 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 GIMD1P0DJR0 217 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 SULT1A3P0DMM9 295 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 SULT1A4P0DMN0 295 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 CSNK2A2P19784 350 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-203ENST00000554264 CELP19835 753 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 HNRNPA2B1P22626 353 aaKnown RBP5.4□□□□□ -1.54
VPS33B-203ENST00000554264 MAPK3P27361 379 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-203ENST00000554264 ACADLP28330 430 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 AKT2P31751 481 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 GKP32189 559 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 MPIP34949 423 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 AHRP35869 848 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 MNDAP41218 407 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 OMPP47874 163 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 CTSCP53634 463 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 HNRNPKP61978 463 aaKnown RBP eCLIP5.4□□□□□ -1.54
VPS33B-203ENST00000554264 MC1RQ01726 317 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 DHODHQ02127 395 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 HSPB3Q12988 150 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 EIF3IQ13347 325 aaKnown RBP5.4□□□□□ -1.54
VPS33B-203ENST00000554264 PIN1Q13526 163 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-203ENST00000554264 IL10RAQ13651 578 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 GALEQ14376 348 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 CEBPEQ15744 281 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 LINC00303Q3SY05 128 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 CDONQ4KMG0 1287 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 FNDC7Q5VTL7 733 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 METRNLQ641Q3 311 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 RAET1GQ6H3X3 334 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 LAMTOR1Q6IAA8 161 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 ACSM5Q6NUN0 579 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 SMARCD3Q6STE5 483 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 WASH2PQ6VEQ5 465 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF620Q6ZNG0 422 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 IQCF2Q8IXL9 164 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 CFAP206Q8IYR0 622 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 PM20D2Q8IYS1 436 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 OR6V1Q8N148 313 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 SYS1Q8N2H4 156 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 RNF175Q8N4F7 328 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 SPICQ8N5J4 248 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 LSMEM1Q8N8F7 131 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 POMGNT2Q8NAT1 580 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 UXS1Q8NBZ7 420 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 FAM98AQ8NCA5 519 aaKnown RBP5.4□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF680Q8NEM1 530 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 TMIEQ8NEW7 156 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 OR5K2Q8NHB8 316 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 RAB24Q969Q5 203 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 VOPP1Q96AW1 172 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 NUS1Q96E22 293 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 HS6ST2Q96MM7 605 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 AMDHD1Q96NU7 426 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 SORCS2Q96PQ0 1159 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 BBS4Q96RK4 519 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 SECISBP2Q96T21 854 aaKnown RBP5.4□□□□□ -1.54
VPS33B-203ENST00000554264 SARGQ9BW04 601 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 ACAT2Q9BWD1 397 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 PLEKHA1Q9HB21 404 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 GPN1Q9HCN4 374 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-203ENST00000554264 POLE3Q9NRF9 147 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 MAT2BQ9NZL9 334 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 RHCGQ9UBD6 479 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 TRPC4Q9UBN4 977 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 ACSL5Q9ULC5 683 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 MGAT4AQ9UM21 535 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 PRELID1Q9Y255 219 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 ENTPD2Q9Y5L3 495 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 CLCA3PQ9Y6N3 262 aa5.4□□□□□ -1.54
VPS33B-203ENST00000554264 MGAQ8IWI9 3026 aa5.4□□□□□ -1.55
VPS33B-203ENST00000554264 TP53BP1Q12888 1972 aaPredicted RBP5.4□□□□□ -1.55
VPS33B-203ENST00000554264 ATMQ13315 3056 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 A0A087WUU8 490 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 CCDC187A0A096LP49 1063 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 A0A0A6YYD5 115 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 LY6G6EA0A0G2JKS1 128 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 TEX13CA0A0J9YWL9 993 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 LINC00854A0A1B0GVQ3 168 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 A0A1W2PNU3 283 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-203ENST00000554264 DAPL1A0PJW8 107 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 CPED1A4D0V7 1026 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 RIIAD1A6NNX1 92 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 SNRPGP15A8MWD9 76 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 A8MX80 341 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 AHRRA9YTQ3 701 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 J3QRE1 110 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 M0R233 179 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 WWP2O00308 870 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 FABP7O15540 132 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 PLOD3O60568 738 aa5.39□□□□□ -1.55
VPS33B-203ENST00000554264 OR7A10O76100 309 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms