RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SELENONQ9NZV5 590 aa15.85■□□□□ 0.13
SHMT2-206ENST00000553529 RCE1Q9Y256 329 aa15.85■□□□□ 0.13
SHMT2-206ENST00000553529 ZANQ9Y493 2812 aa15.85■□□□□ 0.13
SHMT2-206ENST00000553529 HEATR1Q9H583 2144 aaKnown RBP15.85■□□□□ 0.13
SHMT2-206ENST00000553529 OR2T1O43869 369 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 PATE4P0C8F1 98 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 IFNGR1P15260 489 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 IDH3GP51553 393 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-206ENST00000553529 BIDP55957 195 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 PUDPQ08623 228 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 NPRL3Q12980 569 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 CYLC2Q14093 348 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-206ENST00000553529 ZNF74Q16587 644 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 MSMPQ1L6U9 139 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 LRRC23Q53EV4 343 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-206ENST00000553529 AGAP6Q5VW22 663 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 CCDC80Q76M96 950 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 PATL1Q86TB9 770 aaKnown RBP15.84■□□□□ 0.13
SHMT2-206ENST00000553529 MDP1Q86V88 176 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 GPR137CQ8N3F9 429 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 FGFBP3Q8TAT2 258 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 SLC26A7Q8TE54 656 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 NANOS1Q8WY41 292 aaKnown RBP15.84■□□□□ 0.13
SHMT2-206ENST00000553529 TRMT61AQ96FX7 289 aaKnown RBP15.84■□□□□ 0.13
SHMT2-206ENST00000553529 MS4A3Q96HJ5 214 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 TMEM43Q9BTV4 400 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 REG4Q9BYZ8 158 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 MRPL39Q9NYK5 338 aaKnown RBP15.84■□□□□ 0.13
SHMT2-206ENST00000553529 ZNF224Q9NZL3 707 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 MGAT4BQ9UQ53 548 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 ALPK2Q86TB3 2170 aa15.84■□□□□ 0.13
SHMT2-206ENST00000553529 ARPC4-TTLL3A0A0A6YYG9 625 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 TRAPPC13A5PLN9 417 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 RPL36A-HNRNPH2H7BZ11 118 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 HLA-HP01893 362 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 ADORA3P0DMS8 318 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 B4GALT1P15291 398 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 YAP1P46937 504 aaKnown RBP15.83■□□□□ 0.12
SHMT2-206ENST00000553529 CAPZA2P47755 286 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 UBE2NP61088 152 aaKnown RBP15.83■□□□□ 0.12
SHMT2-206ENST00000553529 NAAAQ02083 359 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 HGFACQ04756 655 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 RUNX1T1Q06455 604 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 PIGFQ07326 219 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 PIN1Q13526 163 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-206ENST00000553529 ANKRD16Q6P6B7 361 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 PRIMA1Q86XR5 153 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 FBXL14Q8N1E6 418 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 ANKS4BQ8N8V4 417 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 ADPRHL1Q8NDY3 354 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 OR8J3Q8NGG0 315 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 OR5J2Q8NH18 312 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 HS6ST2Q96MM7 605 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 ECSITQ9BQ95 431 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 CCDC134Q9H6E4 229 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 SNX13Q9Y5W8 968 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 CAPN7Q9Y6W3 813 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 PLCE1Q9P212 2302 aa15.83■□□□□ 0.12
SHMT2-206ENST00000553529 A0A096LNT2 108 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 FMO6PO60774 539 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 WNT11O96014 354 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 IGLV1-44P01699 117 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 C8BP07358 591 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 MDH1P40925 334 aaKnown RBP15.82■□□□□ 0.12
SHMT2-206ENST00000553529 SEC24CP53992 1094 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 VTCN1Q7Z7D3 282 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 RBM15BQ8NDT2 890 aaKnown RBP15.82■□□□□ 0.12
SHMT2-206ENST00000553529 BHLHE22Q8NFJ8 381 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-206ENST00000553529 BOD1Q96IK1 185 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 EPYCQ99645 322 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 ZNF426Q9BUY5 554 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 RHCGQ9UBD6 479 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 CRNNQ9UBG3 495 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-206ENST00000553529 ADAM21Q9UKJ8 722 aa15.82■□□□□ 0.12
SHMT2-206ENST00000553529 LOC102725191A0A1B0GVB3 256 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 FAM220BPB1ANY3 271 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 J3KTA2 159 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 NUDT6P53370 316 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 GYS2P54840 703 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 MFSD13AQ14CX5 517 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 CYBRD1Q53TN4 286 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 TTC33Q6PID6 262 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-206ENST00000553529 C5orf46Q6UWT4 87 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 ABHD12BQ7Z5M8 362 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-206ENST00000553529 ZCCHC24Q8N2G6 241 aaKnown RBP15.81■□□□□ 0.12
SHMT2-206ENST00000553529 SCAIQ8N9R8 606 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 PIK3C3Q8NEB9 887 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 OR6S1Q8NH40 331 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 MOSPD2Q8NHP6 518 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 TPD52L3Q96J77 140 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 SORCS2Q96PQ0 1159 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 PCDHAC1Q9H158 963 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 FAIMQ9NVQ4 179 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 PRDM4Q9UKN5 801 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 CORINQ9Y5Q5 1042 aa15.81■□□□□ 0.12
SHMT2-206ENST00000553529 ZNF99A8MXY4 864 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-206ENST00000553529 NME4O00746 187 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 IGKV3-15P01624 115 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 F13BP05160 661 aa15.8■□□□□ 0.12
SHMT2-206ENST00000553529 ASAH2BP0C7U1 165 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms