RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 SERPINA1P01009 418 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 ASAH2BP0C7U1 165 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 HLA-DOBP13765 273 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 FUT1P19526 365 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 PTNP21246 168 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 ZNF83P51522 516 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 NKX6-1P78426 367 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-204ENST00000553324 SPATS1Q496A3 300 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 GLYATQ6IB77 296 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 PRSS57Q6UWY2 283 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 NHLRC1Q6VVB1 395 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 CYP4Z1Q86W10 505 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 TGIF2LYQ8IUE0 185 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 NKAIN4Q8IVV8 208 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 TMEM123Q8N131 208 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-204ENST00000553324 LILRB1Q8NHL6 650 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-204ENST00000553324 SMAP2Q8WU79 429 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-204ENST00000553324 LIPHQ8WWY8 451 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 BCL2L2Q92843 193 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-204ENST00000553324 SGTBQ96EQ0 304 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 FNDC11Q9BVV2 318 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 CRLF2Q9HC73 371 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 GPR35Q9HC97 309 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 MEPEQ9NQ76 525 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-204ENST00000553324 TAS2R5Q9NYW4 299 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 CISD1Q9NZ45 108 aaKnown RBP13.44□□□□□ -0.26
SHMT2-204ENST00000553324 A4GNTQ9UNA3 340 aa13.44□□□□□ -0.26
SHMT2-204ENST00000553324 VPS13CQ709C8 3753 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 ARPC4-TTLL3A0A0A6YYG9 625 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 A0A1W2PR80 420 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 C11orf98E9PRG8 122 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 BLOC1S5-TXNDC5H3BN57 136 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 M0R1B8 84 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 FAM107AO95990 144 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 PAX1P15863 534 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 KRT72Q14CN4 511 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 TRAM2Q15035 370 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 C3orf36Q3SXR2 165 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 TBRG1Q3YBR2 411 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 SAMD4BQ5PRF9 694 aaKnown RBP13.43□□□□□ -0.26
SHMT2-204ENST00000553324 SLC22A25Q6T423 547 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 C16orf89Q6UX73 402 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 NANOGNBQ7Z5D8 188 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 VTCN1Q7Z7D3 282 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 RNF113BQ8IZP6 322 aaKnown RBP13.43□□□□□ -0.26
SHMT2-204ENST00000553324 PGAM4Q8N0Y7 254 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 FAM169BQ8N8A8 192 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 OR6X1Q8NH79 312 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 TMEM255BQ8WV15 326 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 TXNDC15Q96J42 360 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 EMC6Q9BV81 110 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 GORASP2Q9H8Y8 452 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 MED29Q9NX70 200 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 POU2F3Q9UKI9 436 aa13.43□□□□□ -0.26
SHMT2-204ENST00000553324 SAMD4AQ9UPU9 718 aaKnown RBP13.43□□□□□ -0.26
SHMT2-204ENST00000553324 FAM32AQ9Y421 112 aaKnown RBP13.43□□□□□ -0.26
SHMT2-204ENST00000553324 ZNF99A8MXY4 864 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-204ENST00000553324 SHISA9B4DS77 424 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 M0R3G1 203 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 ENTPD5O75356 428 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 OR7A10O76100 309 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 BCL10O95999 233 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 CD99P14209 185 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 IFNGR1P15260 489 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 RPS4XP62701 263 aaKnown RBP13.42□□□□□ -0.26
SHMT2-204ENST00000553324 ADAM8P78325 824 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 LGALS3BPQ08380 585 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 CEACAM16Q2WEN9 425 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 HIKESHIQ53FT3 197 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 SLC35D2Q76EJ3 337 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 LINGO2Q7L985 606 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 HDDC2Q7Z4H3 204 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 CDK20Q8IZL9 346 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 OFCC1Q8IZS5 231 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 LRRC17Q8N6Y2 441 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 OR6N1Q8NGY5 312 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 SLC25A44Q96H78 314 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-204ENST00000553324 HSH2DQ96JZ2 352 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 C1QTNF6Q9BXI9 259 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 GSX2Q9BZM3 304 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 GRIP2Q9C0E4 1043 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 DCAF13Q9NV06 445 aaKnown RBP13.42□□□□□ -0.26
SHMT2-204ENST00000553324 GMPR2Q9P2T1 348 aaKnown RBP13.42□□□□□ -0.26
SHMT2-204ENST00000553324 STX18Q9P2W9 335 aaKnown RBP13.42□□□□□ -0.26
SHMT2-204ENST00000553324 EGFL7Q9UHF1 273 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 LAMP3Q9UQV4 416 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 POFUT2Q9Y2G5 429 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 CELSR1Q9NYQ6 3014 aa13.42□□□□□ -0.26
SHMT2-204ENST00000553324 A0A1W2PRG6 482 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 SERPINI2O75830 405 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 HSD17B1P14061 328 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 CSNK1A1P48729 337 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 UGT2B15P54855 530 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 CDH11P55287 796 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 BIDP55957 195 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 ARF1P84077 181 aaKnown RBP13.41□□□□□ -0.26
SHMT2-204ENST00000553324 MXRA7P84157 204 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 CAMK2DQ13557 499 aa13.41□□□□□ -0.26
SHMT2-204ENST00000553324 ANKDD1AQ495B1 522 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms