RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 RBPJQ06330 500 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 C1DQ13901 141 aaKnown RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 KEAP1Q14145 624 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 MELKQ14680 651 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 GINS1Q14691 196 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 PDK3Q15120 406 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 RNPS1Q15287 305 aaKnown RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 POU4F3Q15319 338 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 SF3B4Q15427 424 aaKnown RBP eCLIP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ACKR1Q16570 336 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 PGGHGQ32M88 737 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ACSF3Q4G176 576 aaPredicted RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ZNF362Q5T0B9 420 aaPredicted RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 SLC35F1Q5T1Q4 408 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 C6orf52Q5T4I8 152 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 SLX4IPQ5VYV7 408 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 TTC23Q5W5X9 447 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 NSUN5P2Q63ZY6 315 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 C12orf73Q69YU5 71 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 GPR139Q6DWJ6 353 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 GTF2IRD2BQ6EKJ0 949 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ABLIM2Q6H8Q1 611 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 RTL6Q6ICC9 239 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 RPTNQ6XPR3 784 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 C3P1Q6ZMU1 363 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 SEM1Q6ZVN7 128 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 CREB3L2Q70SY1 520 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 SLC35D2Q76EJ3 337 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 P4HA3Q7Z4N8 544 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 GTF2IRD2Q86UP8 949 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 DOLPP1Q86YN1 238 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 WDFY1Q8IWB7 410 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 UEVLDQ8IX04 471 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 TUSC5Q8IXB3 177 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 LNX2Q8N448 690 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 IQCF1Q8N6M8 205 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ZIC4Q8N9L1 334 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ZNF555Q8NEP9 628 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ANKK1Q8NFD2 765 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 OR2T33Q8NG76 320 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 OR9K2Q8NGE7 335 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ZNF519Q8TB69 540 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 RNF128Q8TEB7 428 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 CYGBQ8WWM9 190 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ASB10Q8WXI3 467 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 TFAP2CQ92754 450 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 WNT2BQ93097 391 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 UBE2FQ969M7 185 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ZNF775Q96BV0 537 aaPredicted RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 RASD2Q96D21 266 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 TXNDC15Q96J42 360 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 Q96M85 177 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ZNF570Q96NI8 536 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ERMAPQ96PL5 475 aaPredicted RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ZNF385AQ96PM9 386 aaKnown RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ZNF184Q99676 751 aaPredicted RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 PITX2Q99697 317 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ADI1Q9BV57 179 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 KATNB1Q9BVA0 655 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 IFT27Q9BW83 186 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 POLDIP3Q9BY77 421 aaKnown RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 NDEL1Q9GZM8 345 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 TXNIPQ9H3M7 391 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 RNF122Q9H9V4 155 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 BCO1Q9HAY6 547 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 SLC25A19Q9HC21 320 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 TBC1D23Q9NUY8 699 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 MED29Q9NX70 200 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 TVP23BQ9NYZ1 205 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 KLHL9Q9P2J3 617 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 GRHPRQ9UBQ7 328 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ING1Q9UK53 422 aaPredicted RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 NDRG4Q9ULP0 352 aaKnown RBP3.78□□□□□ -1.8
ERBB3-220ENST00000552691 BAIAP2Q9UQB8 552 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ADAM18Q9Y3Q7 739 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 ZNF175Q9Y473 711 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 FAM215AQ9Y5M1 114 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 FLVCR1Q9Y5Y0 555 aa3.78□□□□□ -1.8
ERBB3-220ENST00000552691 TEX13CA0A0J9YWL9 993 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 SLC35F4A4IF30 521 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 MBD3L4A6NDZ8 208 aaPredicted RBP3.77□□□□□ -1.81
ERBB3-220ENST00000552691 MBD3L3A6NE82 208 aaPredicted RBP3.77□□□□□ -1.81
ERBB3-220ENST00000552691 MBD3L5A6NJ08 208 aaPredicted RBP3.77□□□□□ -1.81
ERBB3-220ENST00000552691 ZNF726A6NNF4 738 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 ZNF724A8MTY0 619 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 B8ZZF3 427 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 M0R129 80 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 GPR171O14626 319 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 ARHGEF9O43307 516 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 PRKYO43930 277 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 TRMUO75648 421 aaKnown RBP3.77□□□□□ -1.81
ERBB3-220ENST00000552691 ZNF432O94892 652 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 TOXO94900 526 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 SLC2A10O95528 541 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 CLIC3O95833 236 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 IL2RAP01589 272 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 HMGN1P05114 100 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 YES1P07947 543 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 STSP08842 583 aa3.77□□□□□ -1.81
ERBB3-220ENST00000552691 GNAO1P09471 354 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms