RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 LINC01590Q5TEZ4 76 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 ANKRD16Q6P6B7 361 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 CCDC107Q8WV48 283 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 HOXB13Q92826 284 aaPredicted RBP13.72□□□□□ -0.21
PDE1B-207ENST00000550620 RERGQ96A58 199 aaPredicted RBP13.72□□□□□ -0.21
PDE1B-207ENST00000550620 CCDC74AQ96AQ1 378 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 RASD2Q96D21 266 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 GPX7Q96SL4 187 aaPredicted RBP13.72□□□□□ -0.21
PDE1B-207ENST00000550620 SLC38A3Q99624 504 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 APOOQ9BUR5 198 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 ZNF416Q9BWM5 594 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 SEMA4CQ9C0C4 833 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 APMAPQ9HDC9 416 aa13.72□□□□□ -0.21
PDE1B-207ENST00000550620 WSB2Q9NYS7 404 aaPredicted RBP13.72□□□□□ -0.21
PDE1B-207ENST00000550620 GGT3PA6NGU5 568 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 RFPL4AA6NLU0 287 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 EFCAB7A8K855 629 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 RFPL4AL1F8VTS6 287 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 SCAMP1O15126 338 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 CTSVO60911 334 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 UPK3AO75631 287 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 SPDEFO95238 335 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 APOC3P02656 99 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 GTF2F2P13984 249 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 MGMTP16455 207 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 IGFALSP35858 605 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 SSBP1Q04837 148 aaKnown RBP13.71□□□□□ -0.21
PDE1B-207ENST00000550620 EIF2B5Q13144 721 aaKnown RBP13.71□□□□□ -0.21
PDE1B-207ENST00000550620 ZMYND11Q15326 602 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 C2orf68Q2NKX9 166 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 C4orf46Q504U0 113 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 LIPNQ5VXI9 398 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 THRSPQ92748 146 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 RNF166Q96A37 237 aaPredicted RBP13.71□□□□□ -0.21
PDE1B-207ENST00000550620 MRPS24Q96EL2 167 aaKnown RBP13.71□□□□□ -0.21
PDE1B-207ENST00000550620 LMF2Q9BU23 707 aaKnown RBP13.71□□□□□ -0.21
PDE1B-207ENST00000550620 ALX4Q9H161 411 aaPredicted RBP13.71□□□□□ -0.21
PDE1B-207ENST00000550620 EXO5Q9H790 373 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 PCDHB16Q9NRJ7 776 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 FRRS1LQ9P0K9 344 aa13.71□□□□□ -0.21
PDE1B-207ENST00000550620 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 PRR32B1ATL7 298 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 CYR61O00622 381 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 IMPA2O14732 288 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 NUPL2O15504 423 aaKnown RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 NDUFA2O43678 99 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 ZNF254O75437 659 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 CDC123O75794 336 aaPredicted RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 MAS1P04201 325 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 ACRP10323 421 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 PRKACAP17612 351 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 CSF2RBP32927 897 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 PSMD4P55036 377 aaKnown RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 RPS4XP62701 263 aaKnown RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 SORDQ00796 357 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 ZNF169Q14929 603 aaPredicted RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 ETFDHQ16134 617 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 MAMSTRQ6ZN01 415 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 MCATQ8IVS2 390 aaKnown RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 TMEM52Q8NDY8 209 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 OR5T2Q8NGG2 359 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 RSC1A1Q92681 617 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 ZNF707Q96C28 371 aaPredicted RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 SCARF2Q96GP6 870 aaPredicted RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 Q96M85 177 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 SLC19A3Q9BZV2 496 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 TBC1D29Q9UFV1 150 aa13.71□□□□□ -0.22
PDE1B-207ENST00000550620 MRM2Q9UI43 246 aaKnown RBP13.71□□□□□ -0.22
PDE1B-207ENST00000550620 A0A0D9SG52 128 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 TMEM72A0PK05 275 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 OR10H2O60403 315 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 KDM4BO94953 1096 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 CBX7O95931 251 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 HTRA4P83105 476 aaPredicted RBP13.7□□□□□ -0.22
PDE1B-207ENST00000550620 PSG6Q00889 435 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 FGL1Q08830 312 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 ZNF141Q15928 474 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 FAM78AQ5JUQ0 283 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 C1orf53Q5VUE5 145 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 DCAF12L2Q5VW00 463 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 LRFN4Q6PJG9 635 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 FIGLAQ6QHK4 219 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 TMEM17Q86X19 198 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 ZNF595Q8IYB9 648 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 CLRN3Q8NCR9 226 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 OR51S1Q8NGJ8 323 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 GPR148Q8TDV2 347 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 ZFYVE21Q9BQ24 234 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 SLC17A9Q9BYT1 436 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 TRPV4Q9HBA0 871 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 CYB5R1Q9UHQ9 305 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 PILRAQ9UKJ1 303 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 SLC6A5Q9Y345 797 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 NOTCH4Q99466 2003 aa13.7□□□□□ -0.22
PDE1B-207ENST00000550620 TRBV5-7A0A0A0MS05 114 aa13.69□□□□□ -0.22
PDE1B-207ENST00000550620 PRSS38A1L453 326 aa13.69□□□□□ -0.22
PDE1B-207ENST00000550620 TMEM212A6NML5 194 aa13.69□□□□□ -0.22
PDE1B-207ENST00000550620 FAM171A2A8MVW0 826 aa13.69□□□□□ -0.22
PDE1B-207ENST00000550620 CTAG2O75638 210 aa13.69□□□□□ -0.22
PDE1B-207ENST00000550620 PMS2P2O95744 297 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms