RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CEACAM16Q2WEN9 425 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 TTC33Q6PID6 262 aaPredicted RBP8.54□□□□□ -1.04
HDAC7-229ENST00000549883 SLC22A25Q6T423 547 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 PIGWQ7Z7B1 504 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 CPLX4Q7Z7G2 160 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 UEVLDQ8IX04 471 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 C20orf196Q8IYI0 205 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 RNF148Q8N7C7 305 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 FAM86B1Q8N7N1 296 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 SCAIQ8N9R8 606 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 FAM156AQ8NDB6 213 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 ADPRHL1Q8NDY3 354 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 OR5J2Q8NH18 312 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 HTRA1Q92743 480 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 FBXW5Q969U6 566 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 Q96MF0 132 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 USB1Q9BQ65 265 aaKnown RBP8.54□□□□□ -1.04
HDAC7-229ENST00000549883 ASPNQ9BXN1 380 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 EVA1AQ9H8M9 152 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 EFCAB1Q9HAE3 211 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 NOX3Q9HBY0 568 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 CRLF2Q9HC73 371 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 ZNF701Q9NV72 531 aaPredicted RBP8.54□□□□□ -1.04
HDAC7-229ENST00000549883 ARL8BQ9NVJ2 186 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 CISD1Q9NZ45 108 aaKnown RBP8.54□□□□□ -1.04
HDAC7-229ENST00000549883 BAG5Q9UL15 447 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 A4GNTQ9UNA3 340 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 CORINQ9Y5Q5 1042 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 MTORP42345 2549 aa8.54□□□□□ -1.04
HDAC7-229ENST00000549883 IGHV1-18A0A0C4DH31 117 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 OVOL3O00110 214 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 SLC43A1O75387 559 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 ZNF682O95780 498 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 MT-ATP6P00846 226 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 ASAH2BP0C7U1 165 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 BIDP55957 195 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 RUNX1T1Q06455 604 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 MELKQ14680 651 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 HMBOX1Q6NT76 420 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 TMEM108Q6UXF1 575 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 HACD2Q6Y1H2 254 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 Q71RC1 249 aaPredicted RBP8.53□□□□□ -1.04
HDAC7-229ENST00000549883 ARPINQ7Z6K5 226 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 YTHDF3Q7Z739 585 aaKnown RBP8.53□□□□□ -1.04
HDAC7-229ENST00000549883 LRRC75A-AS1Q8N1F1 130 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 GPR137CQ8N3F9 429 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 C17orf78Q8N4C9 275 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 MOSPD2Q8NHP6 518 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 TMEM171Q8WVE6 324 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 RASSF5Q8WWW0 418 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 GTPBP3Q969Y2 492 aaKnown RBP8.53□□□□□ -1.04
HDAC7-229ENST00000549883 MPP4Q96JB8 637 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 TRAF4Q9BUZ4 470 aaPredicted RBP8.53□□□□□ -1.04
HDAC7-229ENST00000549883 GSX2Q9BZM3 304 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 ALG2Q9H553 416 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 FKRPQ9H9S5 495 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 NANSQ9NR45 359 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 MAN2C1Q9NTJ4 1040 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 ABCD2Q9UBJ2 740 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 EGFL7Q9UHF1 273 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 GDF2Q9UK05 429 aaPredicted RBP8.53□□□□□ -1.04
HDAC7-229ENST00000549883 MOKQ9UQ07 419 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 AMDHD2Q9Y303 409 aa8.53□□□□□ -1.04
HDAC7-229ENST00000549883 CHD3Q12873 2000 aaKnown RBP8.53□□□□□ -1.04
HDAC7-229ENST00000549883 RPL36A-HNRNPH2H7BZ11 118 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 H7C1Q1 480 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 GSTA4O15217 222 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 OR7A10O76100 309 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 PRSS23O95084 383 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 OR5F1O95221 314 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 SERPINA1P01009 418 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 MT-ND1P03886 318 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 F13BP05160 661 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 UMPSP11172 480 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 MAKP20794 623 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 PTAFRP25105 342 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 CALCRP30988 508 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 AQP2P41181 271 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 ATP5J2P56134 94 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 RPS4XP62701 263 aaKnown RBP8.52□□□□□ -1.05
HDAC7-229ENST00000549883 TGFBR3Q03167 851 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 RPL18Q07020 188 aaKnown RBP8.52□□□□□ -1.05
HDAC7-229ENST00000549883 ZP4Q12836 540 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 MFSD13AQ14CX5 517 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 LAPTM4AQ15012 233 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 SHEQ5VZ18 495 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 ANKRD16Q6P6B7 361 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 TBPL2Q6SJ96 375 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 KLHL17Q6TDP4 642 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 KLHL24Q6TFL4 600 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 CBLL1Q75N03 491 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 SLC35D2Q76EJ3 337 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 ABHD12BQ7Z5M8 362 aaPredicted RBP8.52□□□□□ -1.05
HDAC7-229ENST00000549883 PXKQ7Z7A4 578 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 PIK3C3Q8NEB9 887 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 FGFBP3Q8TAT2 258 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 TMEM239Q8WW34 195 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 BOD1Q96IK1 185 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 RADILQ96JH8 1075 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 HSH2DQ96JZ2 352 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms