RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 NPAS1Q99742 590 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 PCDHB16Q9NRJ7 776 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 DENND4AQ7Z401 1863 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 SPTBP11277 2137 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 H7C417 338 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 FGF17O60258 216 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 RBBP9O75884 186 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 CT62P0C5K7 136 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 SLC35G6P0C7Q6 338 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 FAUP35544 74 aaKnown RBP12.53□□□□□ -0.4
HDAC7-228ENST00000548938 ACAA2P42765 397 aaKnown RBP12.53□□□□□ -0.4
HDAC7-228ENST00000548938 GAB4Q2WGN9 574 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 CLRN3Q8NCR9 226 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 TMEM52Q8NDY8 209 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 OR51S1Q8NGJ8 323 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 FGF13Q92913 245 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 LRRC46Q96FV0 321 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 ASB16Q96NS5 453 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 TIMM29Q9BSF4 260 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 CHST6Q9GZX3 395 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 MTFP1Q9UDX5 166 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 SERGEFQ9UGK8 458 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 ETV7Q9Y603 341 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 H0YC42 278 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 TLX1P31314 330 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-228ENST00000548938 GMFBP60983 142 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 DEFA5Q01523 94 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 Q499Y3 187 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 KIRREL2Q6UWL6 708 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 LRRTM1Q86UE6 522 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 ZNF511Q8NB15 262 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 PXT1Q8NFP0 134 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 OR6K3Q8NGY3 331 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 LRFN5Q96NI6 719 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 PBX4Q9BYU1 374 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 SLITRK2Q9H156 845 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 DNAJB12Q9NXW2 375 aaKnown RBP12.53□□□□□ -0.4
HDAC7-228ENST00000548938 MRTO4Q9UKD2 239 aaKnown RBP12.53□□□□□ -0.4
HDAC7-228ENST00000548938 KLHDC2Q9Y2U9 406 aa12.53□□□□□ -0.4
HDAC7-228ENST00000548938 TRAV8-7A0A075B6U6 113 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 A0A1B0GTH9 108 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 EPOPA6NHQ4 379 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 B3GALT2O43825 422 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 PRAMEF2O60811 474 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 MAS1P04201 325 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 CEACAM5P06731 702 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 RPA2P15927 270 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 ACHEP22303 614 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 RBM34P42696 430 aaKnown RBP12.52□□□□□ -0.41
HDAC7-228ENST00000548938 RPS15AP62244 130 aaKnown RBP12.52□□□□□ -0.41
HDAC7-228ENST00000548938 ERVK-25P63136 954 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 ZNF684Q5T5D7 378 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 AGBL4Q5VU57 503 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 PRSS41Q7RTY9 318 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 OR6N1Q8NGY5 312 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 OR8K3Q8NH51 312 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 MRPL48Q96GC5 212 aaKnown RBP12.52□□□□□ -0.41
HDAC7-228ENST00000548938 MYADMQ96S97 322 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 SERINC2Q96SA4 455 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 STACQ99469 402 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 MRI1Q9BV20 369 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 SLC6A15Q9H2J7 730 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 SFXN1Q9H9B4 322 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 PHPT1Q9NRX4 125 aaPredicted RBP12.52□□□□□ -0.41
HDAC7-228ENST00000548938 MRPS2Q9Y399 296 aaKnown RBP12.52□□□□□ -0.41
HDAC7-228ENST00000548938 SLC22A7Q9Y694 548 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 TICRRQ7Z2Z1 1910 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 GPR89AB7ZAQ6 455 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 CDC123O75794 336 aaPredicted RBP12.52□□□□□ -0.41
HDAC7-228ENST00000548938 GPR89BP0CG08 455 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 RAB3AP20336 220 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 EFNB2P52799 333 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 FAM53BQ14153 422 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 C4orf46Q504U0 113 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 SLC43A2Q8N370 569 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 OR10K1Q8NGX5 313 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 DUSP19Q8WTR2 217 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 TSSK2Q96PF2 358 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 KCNK15Q9H427 330 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 FBXL21Q9UKT6 434 aa12.52□□□□□ -0.41
HDAC7-228ENST00000548938 TRAV14DV4A0A0A6YYC5 116 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 TMEM72A0PK05 275 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 OR6C74A6NCV1 312 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 XRCC3O43542 346 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 CTSVO60911 334 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 ANXA2P07355 339 aaKnown RBP12.51□□□□□ -0.41
HDAC7-228ENST00000548938 GTF2F2P13984 249 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 FNTBP49356 437 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 KCNAB1Q14722 419 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 LINC01590Q5TEZ4 76 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 FBXO42Q6P3S6 717 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 OR10AC1Q8NH08 325 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 OR5AK2Q8NH90 309 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 NT5CQ8TCD5 201 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 C15orf40Q8WUR7 153 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 LCN9Q8WX39 176 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 DVL3Q92997 716 aaPredicted RBP12.51□□□□□ -0.41
HDAC7-228ENST00000548938 NMNAT2Q9BZQ4 307 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 NKX2-4Q9H2Z4 354 aa12.51□□□□□ -0.41
HDAC7-228ENST00000548938 SAV1Q9H4B6 383 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms