RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 CA13Q8N1Q1 262 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 KCNG2Q9UJ96 466 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 DHDHQ9UQ10 334 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 NUBP2Q9Y5Y2 271 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 PRAMEF2O60811 474 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ANKRD34CP0C6C1 535 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 PGAM2P15259 253 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 C4BPBP20851 252 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 ITGA3P26006 1051 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 SLC6A19Q695T7 634 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 MRM1Q6IN84 353 aaKnown RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 APOBEC4Q8WW27 367 aaKnown RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 NRIP3Q9NQ35 241 aa12.97□□□□□ -0.33
CACNB3-209ENST00000548860 SF3B6Q9Y3B4 125 aaKnown RBP12.97□□□□□ -0.33
CACNB3-209ENST00000548860 SLC22A5O76082 557 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 OR7A10O76100 309 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 AHSA1O95433 338 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 RBMS1P29558 406 aaKnown RBP12.96□□□□□ -0.33
CACNB3-209ENST00000548860 HTR4Q13639 388 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 WDR45BQ5MNZ6 344 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 RPL13AP3Q6NVV1 102 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF680Q8NEM1 530 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 OR11H7Q8NGC8 314 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 OR51A4Q8NGJ6 313 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 BRIX1Q8TDN6 353 aaKnown RBP12.96□□□□□ -0.33
CACNB3-209ENST00000548860 NR4A3Q92570 626 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
CACNB3-209ENST00000548860 NT5DC2Q9H857 520 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 CYSLTR2Q9NS75 346 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF281Q9Y2X9 895 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 UBL3O95164 117 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 ZNF35P13682 527 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 FGF9P31371 208 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-209ENST00000548860 ETFDHQ16134 617 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 BATF2Q8N1L9 274 aa12.96□□□□□ -0.33
CACNB3-209ENST00000548860 K7EQS6 105 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 ADAM11O75078 769 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 PEX14O75381 377 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 OR2T7P0C7T2 308 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 SLC2A5P22732 501 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.34
CACNB3-209ENST00000548860 BLKP51451 505 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 CDK5R1Q15078 307 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 OR7A5Q15622 319 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 EOGTQ5NDL2 527 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 FAM69BQ5VUD6 431 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 ZNF425Q6IV72 752 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 TEX19Q8NA77 164 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 GALNT11Q8NCW6 608 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 OR51S1Q8NGJ8 323 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 OR2T27Q8NH04 317 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 ZNRF4Q8WWF5 429 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 KTI12Q96EK9 354 aaPredicted RBP12.96□□□□□ -0.34
CACNB3-209ENST00000548860 WDFY2Q96P53 400 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 GTPBP2Q9BX10 602 aaKnown RBP12.96□□□□□ -0.34
CACNB3-209ENST00000548860 IFT46Q9NQC8 304 aa12.96□□□□□ -0.34
CACNB3-209ENST00000548860 NPIPA5E9PKD4 350 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 CDKN2AP42771 156 aaKnown RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 EIF2B1Q14232 305 aaKnown RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 KLHL24Q6TFL4 600 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 OR2L13Q8N349 312 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 ATOH1Q92858 354 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 MS4A3Q96HJ5 214 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 FAM71F1Q96KD3 344 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 PRSS27Q9BQR3 290 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 PITHD1Q9GZP4 211 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 PLEKHA1Q9HB21 404 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 DUSP22Q9NRW4 184 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 MED17Q9NVC6 651 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 VSX1Q9NZR4 365 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 NPIPA1Q9UND3 350 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 NGFRP08138 427 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 SELENOPP49908 381 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 FAM74A1Q5RGS3 127 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 SFRP5Q5T4F7 317 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 Q6ZTK2 550 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 SLC29A4Q7RTT9 530 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 NUP54Q7Z3B4 507 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 BCORP1Q8N888 145 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 C19orf47Q8N9M1 422 aaKnown RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 ZNF350Q9GZX5 532 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 ACAD8Q9UKU7 415 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 BAIAP2Q9UQB8 552 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 SLC33A1O00400 549 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 OIP5O43482 229 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 BRINP1O60477 761 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 MPZL1O95297 269 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 EFEMP2O95967 443 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 ATP1B1P05026 303 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 GLI4P10075 376 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 EXOSC2Q13868 293 aaKnown RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 DUSP6Q16828 381 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 SLC22A10Q63ZE4 541 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 ZNF767PQ75MW2 155 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 ASB12Q8WXK4 309 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 GIMAP5Q96F15 307 aa12.95□□□□□ -0.34
CACNB3-209ENST00000548860 SLC25A44Q96H78 314 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-209ENST00000548860 SFXN2Q96NB2 322 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms