RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 POU3F1Q03052 451 aaPredicted RBP15.07■□□□□ 0
CHMP1A-205ENST00000548650 NPRL3Q12980 569 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 MFSD13AQ14CX5 517 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 OR1Q1Q15612 314 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 MS4A18Q3C1V0 323 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 AGKQ53H12 422 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 TTMPQ5BVD1 217 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 SWT1Q5T5J6 900 aaKnown RBP15.07■□□□□ 0
CHMP1A-205ENST00000548650 DLEU7Q6UYE1 221 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 NHLRC1Q6VVB1 395 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 MDP1Q86V88 176 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 PTOV1Q86YD1 416 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 WDFY1Q8IWB7 410 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 UEVLDQ8IX04 471 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 PHC2Q8IXK0 858 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 C20orf196Q8IYI0 205 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 HIPK4Q8NE63 616 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 ATP6V1G3Q96LB4 118 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 MOGAT1Q96PD6 335 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 ZNF607Q96SK3 696 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 EPYCQ99645 322 aa15.07■□□□□ 0
CHMP1A-205ENST00000548650 REPIN1Q9BWE0 567 aaKnown RBP15.07■□□□□ 0
CHMP1A-205ENST00000548650 LOC390937A0A1W2PQ73 354 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 LRRN3E7EW58 273 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 M0R3G1 203 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 MFN2O95140 757 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 NQO1P15559 274 aaKnown RBP15.06■□□□□ 0
CHMP1A-205ENST00000548650 IGFBP5P24593 272 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 THBS4P35443 961 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 GZMKP49863 264 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 CARD17Q5XLA6 110 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 RANBP3LQ86VV4 465 aaPredicted RBP15.06■□□□□ 0
CHMP1A-205ENST00000548650 ARMC8Q8IUR7 673 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 BHLHE22Q8NFJ8 381 aaPredicted RBP15.06■□□□□ 0
CHMP1A-205ENST00000548650 TMEM43Q9BTV4 400 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 EMC6Q9BV81 110 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 ASPNQ9BXN1 380 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 TMEM27Q9HBJ8 222 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 NOX3Q9HBY0 568 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 MED29Q9NX70 200 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 MRPL39Q9NYK5 338 aaKnown RBP15.06■□□□□ 0
CHMP1A-205ENST00000548650 SELENONQ9NZV5 590 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 LPAR3Q9UBY5 353 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 USP22Q9UPT9 525 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 ANGPT4Q9Y264 503 aa15.06■□□□□ 0
CHMP1A-205ENST00000548650 SVEP1Q4LDE5 3571 aa15.05■□□□□ 0
CHMP1A-205ENST00000548650 EVPLLA8MZ36 301 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 hCG_2039718K7EN88 272 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 M0R3H8 397 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 SERPINB7O75635 380 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 CDH12P55289 794 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 PUDPQ08623 228 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 CARTPTQ16568 116 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 ZNF627Q7L945 461 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 DHDDSQ86SQ9 333 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 SVOPLQ8N434 492 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 ARIH2OSQ8N7S6 290 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 RNF217Q8TC41 542 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 STON2Q8WXE9 905 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 FOXN4Q96NZ1 517 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 ARHGDIGQ99819 225 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 BPESC1Q9GZL8 116 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 ZNF385DQ9H6B1 395 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 EVA1AQ9H8M9 152 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 B3GNT2Q9NY97 397 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 SLC13A4Q9UKG4 626 aa15.05■□□□□ -0
CHMP1A-205ENST00000548650 SLC35F4A4IF30 521 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 PHF1O43189 567 aaPredicted RBP15.04■□□□□ -0
CHMP1A-205ENST00000548650 LMX1BO60663 402 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 FMO6PO60774 539 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 HLA-HP01893 362 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 OPN1SWP03999 348 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 IGFBP1P08833 259 aaPredicted RBP15.04■□□□□ -0
CHMP1A-205ENST00000548650 NPR2P20594 1047 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 CAPZA2P47755 286 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 PMS2P3Q13401 168 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 SNTB2Q13425 540 aaKnown RBP15.04■□□□□ -0
CHMP1A-205ENST00000548650 SELPLGQ14242 412 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 NPTX1Q15818 432 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 RUNDC3AQ59EK9 446 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 RETREG3Q86VR2 466 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 CCDC36Q8IYA8 594 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 CDK20Q8IZL9 346 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 SMYD1Q8NB12 490 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 C11orf65Q8NCR3 313 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 GPR32P1Q8NGA4 272 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 MSI2Q96DH6 328 aaKnown RBP15.04■□□□□ -0
CHMP1A-205ENST00000548650 TXNDC15Q96J42 360 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 LRR1Q96L50 414 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 ZNF75AQ96N20 296 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 DOK1Q99704 481 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 BEX2Q9BXY8 128 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 ZNF224Q9NZL3 707 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 LEF1Q9UJU2 399 aaPredicted RBP15.04■□□□□ -0
CHMP1A-205ENST00000548650 NOX1Q9Y5S8 564 aa15.04■□□□□ -0
CHMP1A-205ENST00000548650 TMEM129A0AVI4 362 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 PLPP3O14495 311 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 APEHP13798 732 aaKnown RBP15.03■□□□□ -0
CHMP1A-205ENST00000548650 B4GALT1P15291 398 aa15.03■□□□□ -0
CHMP1A-205ENST00000548650 ZNF23P17027 643 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms