RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 MZT2AQ6P582 158 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 PLET1Q6UQ28 207 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 C17orf82Q86X59 251 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-209ENST00000547018 IFI44Q8TCB0 444 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 SLC41A2Q96JW4 573 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 TSPAN32Q96QS1 320 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 MMACHCQ9Y4U1 282 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 AKR7A3O95154 331 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 PNMTP11086 282 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 F8A1P23610 371 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 CCKBRP32239 447 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 RBM34P42696 430 aaKnown RBP11.53□□□□□ -0.56
SCAF11-209ENST00000547018 RFX2P48378 723 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 CD97P48960 835 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 MESTQ5EB52 335 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 FAM220AQ7Z4H9 259 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 OR7G1Q8NGA0 311 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 OR10G3Q8NGC4 313 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 OR1F2PQ96R84 312 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 PELOQ9BRX2 385 aaKnown RBP11.53□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF426Q9BUY5 554 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 NRIP3Q9NQ35 241 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 IQCMA0A1B0GVH7 501 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 ISPDA4D126 451 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 FRG2CA6NGY1 282 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 PCNX2A6NKB5 2137 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 A6NL46 340 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 ZFPL1O95159 310 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 AHSA1O95433 338 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 ADH7P40394 386 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 DIO1P49895 249 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 PRPS1P60891 318 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 RPS18P62269 152 aaKnown RBP11.53□□□□□ -0.56
SCAF11-209ENST00000547018 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.53□□□□□ -0.56
SCAF11-209ENST00000547018 LCN1P1Q5VSP4 162 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 OR51A4Q8NGJ6 313 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 OR14A16Q8NHC5 309 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF285Q96NJ3 590 aa11.53□□□□□ -0.56
SCAF11-209ENST00000547018 PTRH2Q9Y3E5 179 aaKnown RBP11.53□□□□□ -0.56
SCAF11-209ENST00000547018 DSPP15924 2871 aaKnown RBP11.53□□□□□ -0.56
SCAF11-209ENST00000547018 MEN1O00255 615 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 RENP00797 406 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 DCDP81605 110 aaKnown RBP11.52□□□□□ -0.56
SCAF11-209ENST00000547018 POU3F1Q03052 451 aaPredicted RBP11.52□□□□□ -0.56
SCAF11-209ENST00000547018 GFOD2Q3B7J2 385 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 HSD17B12Q53GQ0 312 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 CEP78Q5JTW2 689 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 GPALPP1Q8IXQ4 340 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 DEFB126Q9BYW3 111 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 KCNK15Q9H427 330 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 SEC61A2Q9H9S3 476 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 SLC22A13Q9Y226 551 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 A3GALT2U3KPV4 340 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 EML5Q05BV3 1969 aa11.52□□□□□ -0.56
SCAF11-209ENST00000547018 SMLR1H3BR10 107 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 FLRT2O43155 660 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 PTTG1O95997 202 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 ATF1P18846 271 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 RCVRNP35243 200 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 COX15Q7KZN9 410 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 TSEN15Q8WW01 171 aaKnown RBP11.52□□□□□ -0.57
SCAF11-209ENST00000547018 TWSG1Q9GZX9 223 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 HOXD1Q9GZZ0 328 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 LAMA5O15230 3695 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 IGKV3D-11A0A0A0MRZ8 115 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 FITM1A5D6W6 292 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 MEIS3P1A6NDR6 274 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 ZNF593O00488 134 aaPredicted RBP11.52□□□□□ -0.57
SCAF11-209ENST00000547018 ADRB1P08588 477 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 SLC2A5P22732 501 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 FGF9P31371 208 aaPredicted RBP11.52□□□□□ -0.57
SCAF11-209ENST00000547018 KIR2DL3P43628 341 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 PPP3R1P63098 170 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 TBRG1Q3YBR2 411 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 LRFN4Q6PJG9 635 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 BEST4Q8NFU0 473 aa11.52□□□□□ -0.57
SCAF11-209ENST00000547018 FYTTD1Q96QD9 318 aaKnown RBP11.52□□□□□ -0.57
SCAF11-209ENST00000547018 NBASA2RRP1 2371 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 DMXL1Q9Y485 3027 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 MEIOCA2RUB1 952 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 OR2T7P0C7T2 308 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 EVX1P49640 407 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 EPHA4P54764 986 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 ADAM8P78325 824 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 C1orf140Q5VVS0 124 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 XKRXQ6PP77 449 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 LINC00114Q6XXX2 140 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 LINGO2Q7L985 606 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 OR2T27Q8NH04 317 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 TXNDC15Q96J42 360 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 H0YC42 278 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 PLA2G10O15496 165 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 ETV6P41212 452 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 CASP3P42574 277 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 ACTC1P68032 377 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 ACTA1P68133 377 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 ACY1Q03154 408 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 ANKRD37Q7Z713 158 aa11.51□□□□□ -0.57
SCAF11-209ENST00000547018 ADGRG3Q86Y34 549 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms