RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TEX101Q9BY14 249 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 POFUT1Q9H488 388 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 MKKSQ9NPJ1 570 aaPredicted RBP12.97□□□□□ -0.33
SRP54-202ENST00000546080 RXFP3Q9NSD7 469 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 SLC39A1Q9NY26 324 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 CPNE7Q9UBL6 633 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 STEAP1Q9UHE8 339 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 KCNK7Q9Y2U2 307 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 PLEKHM1Q9Y4G2 1056 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 GPR89AB7ZAQ6 455 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 NARSO43776 548 aaKnown RBP12.96□□□□□ -0.33
SRP54-202ENST00000546080 GLCEO94923 617 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 SLC35G6P0C7Q6 338 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 GPR89BP0CG08 455 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 EMDP50402 254 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 SCAND1P57086 179 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 DEFB103AP81534 67 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 ZNF234Q14588 700 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 DEFB134Q4QY38 66 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 EXOSC6Q5RKV6 272 aaKnown RBP12.96□□□□□ -0.33
SRP54-202ENST00000546080 ANKRD16Q6P6B7 361 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 ZAR1Q86SH2 424 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 C12orf45Q8N5I9 185 aaPredicted RBP12.96□□□□□ -0.33
SRP54-202ENST00000546080 RNF166Q96A37 237 aaPredicted RBP12.96□□□□□ -0.33
SRP54-202ENST00000546080 RAB7BQ96AH8 199 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 SERINC2Q96SA4 455 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 TRPV4Q9HBA0 871 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 UPB1Q9UBR1 384 aa12.96□□□□□ -0.33
SRP54-202ENST00000546080 NUMA1Q14980 2115 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 DISC1C4P0D8 188 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 B3GALT2O43825 422 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 CTAG2O75638 210 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 ATG12O94817 140 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 PMS2P2O95744 297 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 ADH1CP00326 375 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 CD3DP04234 171 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 CSF2RBP32927 897 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 PSMD4P55036 377 aaKnown RBP12.96□□□□□ -0.34
SRP54-202ENST00000546080 RPS15AP62244 130 aaKnown RBP12.96□□□□□ -0.34
SRP54-202ENST00000546080 RUNX2Q13950 521 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 EXOSC7Q15024 291 aaKnown RBP12.96□□□□□ -0.34
SRP54-202ENST00000546080 ZNF684Q5T5D7 378 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 STEAP1BQ6NZ63 245 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 CACUL1Q86Y37 369 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 KCNRGQ8N5I3 272 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 STEAP2Q8NFT2 490 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 ING5Q8WYH8 240 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 DVL3Q92997 716 aaPredicted RBP12.96□□□□□ -0.34
SRP54-202ENST00000546080 TSNAXQ99598 290 aaKnown RBP12.96□□□□□ -0.34
SRP54-202ENST00000546080 C12orf57Q99622 126 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 TIMM29Q9BSF4 260 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 HDAC8Q9BY41 377 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 CAPN10Q9HC96 672 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 DAPP1Q9UN19 280 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 ZNF337Q9Y3M9 751 aa12.96□□□□□ -0.34
SRP54-202ENST00000546080 TRAV8-7A0A075B6U6 113 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 TRAV18A0A075B6X5 111 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 A0A087WV62 115 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 TRBV5-5A0A0J9YX44 114 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 ADAM11O75078 769 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 LDB3O75112 727 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 DNAJB6O75190 326 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 RASGRP1O95267 797 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 PAK4O96013 591 aaPredicted RBP12.95□□□□□ -0.34
SRP54-202ENST00000546080 GP1BAP07359 652 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 H2AFB1P0C5Y9 115 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 OR4E1P0C645 316 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 PRSS3P35030 304 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 ACAA2P42765 397 aaKnown RBP12.95□□□□□ -0.34
SRP54-202ENST00000546080 GXYLT1Q4G148 440 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 LY6G6FQ5SQ64 297 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 LIPNQ5VXI9 398 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 ZCCHC12Q6PEW1 402 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 HAGHLQ6PII5 290 aaPredicted RBP12.95□□□□□ -0.34
SRP54-202ENST00000546080 NT5CQ8TCD5 201 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 PMM1Q92871 262 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 ZNF707Q96C28 371 aaPredicted RBP12.95□□□□□ -0.34
SRP54-202ENST00000546080 ADAD1Q96M93 576 aaKnown RBP12.95□□□□□ -0.34
SRP54-202ENST00000546080 ALG12Q9BV10 488 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 NMNAT2Q9BZQ4 307 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 ALX4Q9H161 411 aaPredicted RBP12.95□□□□□ -0.34
SRP54-202ENST00000546080 PIGMQ9H3S5 423 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 C1orf198Q9H425 327 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 SCPEP1Q9HB40 452 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 DNAJB12Q9NXW2 375 aaKnown RBP12.95□□□□□ -0.34
SRP54-202ENST00000546080 FRRS1LQ9P0K9 344 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 CYB5R1Q9UHQ9 305 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 GPN3Q9UHW5 284 aaPredicted RBP12.95□□□□□ -0.34
SRP54-202ENST00000546080 ZNF230Q9UIE0 474 aaPredicted RBP12.95□□□□□ -0.34
SRP54-202ENST00000546080 SCN3AQ9NY46 2000 aa12.95□□□□□ -0.34
SRP54-202ENST00000546080 TMEM72A0PK05 275 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 BCL2L11O43521 198 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 EFNB2P52799 333 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 NKAIN2Q5VXU1 208 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 GLT8D1Q68CQ7 371 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 JMJD6Q6NYC1 403 aaPredicted RBP12.94□□□□□ -0.34
SRP54-202ENST00000546080 LEG1Q6P5S2 330 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 UQCC3Q6UW78 93 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 TMED4Q7Z7H5 227 aa12.94□□□□□ -0.34
SRP54-202ENST00000546080 OR51D1Q8NGF3 324 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms