RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 OPN1LWP04000 364 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 ACADSP16219 412 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 ZNF3P17036 446 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 POU1F1P28069 291 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 NOS3P29474 1203 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 CTXN1P60606 82 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 RPL27P61353 136 aaKnown RBP14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 MYBPC1Q00872 1141 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 POU3F1Q03052 451 aaPredicted RBP14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 SRYQ05066 204 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 C1DQ13901 141 aaKnown RBP14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 SLC25A30Q5SVS4 291 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 ANKRD34AQ69YU3 496 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 THSD4Q6ZMP0 1018 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 ARIH2OSQ8N7S6 290 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 OR9K2Q8NGE7 335 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 MOSPD2Q8NHP6 518 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 CYGBQ8WWM9 190 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 INTS12Q96CB8 462 aaKnown RBP14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 GMPPAQ96IJ6 420 aaPredicted RBP14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 PLEKHA8Q96JA3 519 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 ALG12Q9BV10 488 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 IMPAD1Q9NX62 359 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 LRRC42Q9Y546 428 aa14.29□□□□□ -0.12
PRPF40A-212ENST00000545856 MBD3L4A6NDZ8 208 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 MBD3L3A6NE82 208 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 MBD3L5A6NJ08 208 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 SNTNA6NMZ2 147 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 RIIAD1A6NNX1 92 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 MCIDASD6RGH6 385 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 H0YC42 278 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 XKRYO14609 159 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 DENRO43583 198 aaKnown RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 BCL10O95999 233 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 PAICSP22234 425 aaKnown RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 ACVR2AP27037 513 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 TIMP3P35625 211 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 CENPAP49450 140 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 CASP6P55212 293 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 TPD52P55327 224 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 RASGEF1BQ0VAM2 473 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 ACKR1Q16570 336 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 ZIK1Q3SY52 487 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 ZNF691Q5VV52 312 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 MEDAGQ5VYS4 303 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 NHLRC1Q6VVB1 395 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 SLC35D2Q76EJ3 337 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 FGD2Q7Z6J4 655 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 MEX3DQ86XN8 651 aaKnown RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 MCEMP1Q8IX19 187 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 C8orf59Q8N0T1 100 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 OR6X1Q8NH79 312 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 MBD3L2Q8NHZ7 208 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 ZNF845Q96IR2 970 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 KLHL13Q9P2N7 655 aa14.28□□□□□ -0.12
PRPF40A-212ENST00000545856 SURF4O15260 269 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 SLC19A2O60779 497 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 TPOP07202 933 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 MYF6P23409 242 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 PCYT1AP49585 367 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 SNRPGP62308 76 aaKnown RBP14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 NFATC3Q12968 1075 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 STK11Q15831 433 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 CLEC12AQ5QGZ9 265 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 ARMC4Q5T2S8 1044 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 C1orf185Q5T7R7 199 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 CREB3L2Q70SY1 520 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 P4HA3Q7Z4N8 544 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 GPAT4Q86UL3 456 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 ZNF519Q8TB69 540 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 FNDC9Q8TBE3 224 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 ASB10Q8WXI3 467 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 LRR1Q96L50 414 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 Q96MT0 163 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 ERMAPQ96PL5 475 aaPredicted RBP14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 PNPLA3Q9NST1 481 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 SEC14L4Q9UDX3 406 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 FLVCR1Q9Y5Y0 555 aa14.27□□□□□ -0.12
PRPF40A-212ENST00000545856 SPENQ96T58 3664 aaKnown RBP14.27□□□□□ -0.13
PRPF40A-212ENST00000545856 C11orf98E9PRG8 122 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 SS18L1O75177 396 aaPredicted RBP14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 PPP1R3DO95685 299 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 IGHG1P01857 330 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 F13BP05160 661 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 YES1P07947 543 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 EPHA2P29317 976 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 EFNB1P98172 346 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 ITGADQ13349 1161 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 TMED1Q13445 227 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 KRR1Q13601 381 aaKnown RBP14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 SNAPC1Q16533 368 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 B3GNT6Q6ZMB0 384 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 THAP5Q7Z6K1 395 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 CD163Q86VB7 1156 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 JAZF1Q86VZ6 243 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 OR4Q3Q8NH05 313 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 FAM81AQ8TBF8 368 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 SLC25A44Q96H78 314 aaPredicted RBP14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 TSPAN32Q96QS1 320 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 LRCH1Q9Y2L9 728 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms