RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 MOV10Q9HCE1 1003 aaKnown RBP13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 HINT3Q9NQE9 182 aaKnown RBP13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 TAAR3PQ9P1P4 343 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 INSIG2Q9Y5U4 225 aa13.01□□□□□ -0.33
CLSTN3-216ENST00000545663 ISPDA4D126 451 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 NPIPB8E9PQR5 432 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 H0YL77 283 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 AKAP10O43572 662 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 PIP5K1CO60331 668 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 FOXH1O75593 365 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 CSTAP01040 98 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 HLA-HP01893 362 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 OPN1MWP04001 364 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 CHRNGP07510 517 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 OPN1MW2P0DN77 364 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 OPN1MW3P0DN78 364 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 SEC61A1P61619 476 aaKnown RBP13□□□□□ -0.33
CLSTN3-216ENST00000545663 GKAP1Q5VSY0 366 aaPredicted RBP13□□□□□ -0.33
CLSTN3-216ENST00000545663 NOXRED1Q6NXP6 359 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 NIPAL3Q6P499 406 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 LRRC34Q8IZ02 419 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 ST7LQ8TDW4 575 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 ZDHHC16Q969W1 377 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 MRI1Q9BV20 369 aa13□□□□□ -0.33
CLSTN3-216ENST00000545663 SIRT3Q9NTG7 399 aaPredicted RBP13□□□□□ -0.33
CLSTN3-216ENST00000545663 ZCCHC3Q9NUD5 404 aaKnown RBP13□□□□□ -0.33
CLSTN3-216ENST00000545663 TMEM72A0PK05 275 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 TRPC5OSA6NMA1 111 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 FRS3O43559 492 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 FCMRO60667 390 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 PRPH2P23942 346 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 CD80P33681 288 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 PIGFQ07326 219 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 PDCD1Q15116 288 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 GPR68Q15743 365 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 TMEM154Q6P9G4 183 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 CREB3L2Q70SY1 520 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 GRINAQ7Z429 371 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 TWIST2Q8WVJ9 160 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 SGCDQ92629 289 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 TIMD4Q96H15 378 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 PPP3R2Q96LZ3 170 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 SDF2Q99470 211 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 SLC30A2Q9BRI3 323 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 SIKE1Q9BRV8 207 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 NECAP2Q9NVZ3 263 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 B3GNT2Q9NY97 397 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF346Q9UL40 294 aaKnown RBP12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 TMED5Q9Y3A6 229 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 DNAJC15Q9Y5T4 150 aa12.99□□□□□ -0.33
CLSTN3-216ENST00000545663 TMED7-TICAM2A0A0A6YYA0 188 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 ANKRD28O15084 1053 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 HDAC3O15379 428 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 TPD52L2O43399 206 aaKnown RBP12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF432O94892 652 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 PLATP00750 562 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 IGHMP01871 453 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 MAKP20794 623 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 MAPK1P28482 360 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 FRKP42685 505 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 MAD2L1Q13257 205 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 CEACAM7Q14002 265 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 MAPK14Q16539 360 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 TSTQ16762 297 aaKnown RBP12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 SMU1Q2TAY7 513 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 HFEQ30201 348 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 TRMT5Q32P41 509 aaKnown RBP12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 BRD3OSQ6XYD6 125 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 EPHX4Q8IUS5 362 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 DDIASQ8IXT1 998 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 ZFP28Q8NHY6 868 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 ADAMTS15Q8TE58 950 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 CCL17Q92583 94 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF75AQ96N20 296 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 SF3B5Q9BWJ5 86 aaKnown RBP12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 CCDC134Q9H6E4 229 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 NPHS2Q9NP85 383 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 SH3BP4Q9P0V3 963 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 TMED7Q9Y3B3 224 aa12.98□□□□□ -0.33
CLSTN3-216ENST00000545663 AQP7P3A6NL99 342 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 ITM2AO43736 263 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 UGT2B17O75795 530 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 TGDSO95455 350 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF14P17017 642 aaPredicted RBP12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 PGM1P36871 562 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 MDH1P40925 334 aaKnown RBP12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 FOXA1P55317 472 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 SH3BGRP55822 239 aaPredicted RBP12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 PAX8Q06710 450 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 OR7A5Q15622 319 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF141Q15928 474 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 UGT3A2Q3SY77 523 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 CLEC6AQ6EIG7 209 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 HMGN2P46Q86SG4 172 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 ZNF781Q8N8C0 355 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 OR5D16Q8NGK9 328 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 PPCDCQ96CD2 204 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 SORT1Q99523 831 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 ACTRT3Q9BYD9 372 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 NMUR2Q9GZQ4 415 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms