RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 DSCR9P59020 149 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 CHRNB3Q05901 458 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 NHLRC1Q6VVB1 395 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 RBM45Q8IUH3 476 aaKnown RBP18.35■□□□□ 0.53
SCARB1-210ENST00000545493 FAM169BQ8N8A8 192 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 C10orf105Q8TEF2 133 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 TAMM41Q96BW9 452 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 SORCS2Q96PQ0 1159 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 MCHR1Q99705 422 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 EMC6Q9BV81 110 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 ASPNQ9BXN1 380 aa18.35■□□□□ 0.53
SCARB1-210ENST00000545493 ARGLU1Q9NWB6 273 aaPredicted RBP18.35■□□□□ 0.53
SCARB1-210ENST00000545493 MRPL39Q9NYK5 338 aaKnown RBP18.35■□□□□ 0.53
SCARB1-210ENST00000545493 ZNF99A8MXY4 864 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-210ENST00000545493 M0R3G1 203 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 CHP2O43745 196 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 TLX2O43763 284 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-210ENST00000545493 CRYAAP02489 173 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 HOXB1P14653 301 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-210ENST00000545493 SLC25A16P16260 332 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 PAX7P23759 505 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 PCGF2P35227 344 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 IDH3GP51553 393 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-210ENST00000545493 CRYBA2P53672 197 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 PUDPQ08623 228 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 ADIPOQQ15848 244 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 CARD17Q5XLA6 110 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 ZNF613Q6PF04 617 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 LINC00114Q6XXX2 140 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 C20orf196Q8IYI0 205 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 TSPEARQ8WU66 669 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 NANOS1Q8WY41 292 aaKnown RBP18.34■□□□□ 0.53
SCARB1-210ENST00000545493 KCNS3Q9BQ31 491 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 NOX3Q9HBY0 568 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 PMF1-BGLAPU3KQ54 211 aa18.34■□□□□ 0.53
SCARB1-210ENST00000545493 CPSF4LA6NMK7 179 aaKnown RBP18.33■□□□□ 0.52
SCARB1-210ENST00000545493 M0QX08 132 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 FBP2O00757 339 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 PDE5AO76074 875 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 CBR1P16152 277 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 GZMMP51124 257 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 SNRPD2P62316 118 aaKnown RBP18.33■□□□□ 0.52
SCARB1-210ENST00000545493 LOXL1Q08397 574 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-210ENST00000545493 TMEM249Q2WGJ8 235 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 ENTPD8Q5MY95 495 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 C6orf52Q5T4I8 152 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 MDP1Q86V88 176 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 OR10A6Q8NH74 314 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 VANGL1Q8TAA9 524 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-210ENST00000545493 FAM168AQ92567 244 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 TXNDC15Q96J42 360 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 MDFIQ99750 246 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 TMEM120AQ9BXJ8 343 aa18.33■□□□□ 0.52
SCARB1-210ENST00000545493 MOV10Q9HCE1 1003 aaKnown RBP18.33■□□□□ 0.52
SCARB1-210ENST00000545493 YLPM1P49750 1951 aaKnown RBP18.32■□□□□ 0.52
SCARB1-210ENST00000545493 SLC35F4A4IF30 521 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 FXYD1O00168 92 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 PLPP3O14495 311 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 C8BP07358 591 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 CSF3P09919 207 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 BMP4P12644 408 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 HGFACQ04756 655 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 NPRL3Q12980 569 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 PMS2P3Q13401 168 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 EFNB3Q15768 340 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 TRMT5Q32P41 509 aaKnown RBP18.32■□□□□ 0.52
SCARB1-210ENST00000545493 VHLLQ6RSH7 139 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 NUP37Q8NFH4 326 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 TNFRSF13CQ96RJ3 184 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 YAE1D1Q9NRH1 226 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 NOX1Q9Y5S8 564 aa18.32■□□□□ 0.52
SCARB1-210ENST00000545493 IGHV2OR16-5A0A0B4J2B6 119 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 SERPINI2O75830 405 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 F12P00748 615 aaPredicted RBP18.31■□□□□ 0.52
SCARB1-210ENST00000545493 MT-ATP6P00846 226 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 OR4A8P0C604 315 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 SERPINF1P36955 418 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 VLDLRP98155 873 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 CAMK2DQ13557 499 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 VMACQ2NL98 169 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 CGB2Q6NT52 195 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 PATL1Q86TB9 770 aaKnown RBP18.31■□□□□ 0.52
SCARB1-210ENST00000545493 SLC30A8Q8IWU4 369 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 C10orf53Q8N6V4 93 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 ANKS4BQ8N8V4 417 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 OR5J2Q8NH18 312 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 ADAMTS16Q8TE57 1224 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 LRR1Q96L50 414 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 PCDHAC1Q9H158 963 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 PLK3Q9H4B4 646 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 FKBP7Q9Y680 259 aa18.31■□□□□ 0.52
SCARB1-210ENST00000545493 B9A039 149 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 ARR3P36575 388 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 CAPZA2P47755 286 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 ZNF74Q16587 644 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 ZNF627Q7L945 461 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 PXKQ7Z7A4 578 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 OR4F15Q8NGB8 312 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 ZNF426Q9BUY5 554 aa18.3■□□□□ 0.52
SCARB1-210ENST00000545493 ZNF442Q9H7R0 627 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms