RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 C11orf65Q8NCR3 313 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 WFDC11Q8NEX6 87 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 OR9K2Q8NGE7 335 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 DNAJA4Q8WW22 397 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-223ENST00000545440 MUCL1Q96DR8 90 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 ANKRD27Q96NW4 1050 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF607Q96SK3 696 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 TAPBPLQ9BX59 468 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 AMBRA1Q9C0C7 1298 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 CXorf56Q9H5V9 222 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 PARPBPQ9NWS1 579 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 ADPRHL2Q9NX46 363 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 NDUFAF1Q9Y375 327 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 RNF114Q9Y508 228 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-223ENST00000545440 TLN2Q9Y4G6 2542 aa6.75□□□□□ -1.33
SNHG1-223ENST00000545440 NSD1Q96L73 2696 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 SETD2Q9BYW2 2564 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 FTCDNL1E5RQL4 147 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 SERPINB7O75635 380 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 AKR7A3O95154 331 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 PLAUP00749 431 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 ITGA5P08648 1049 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 CLEC2LP0C7M8 214 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 TROVE2P10155 538 aaKnown RBP eCLIP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 PNMTP11086 282 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 HTR2AP28223 471 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 GTF2E2P29084 291 aaKnown RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 PTH2RP49190 550 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 P2RY4P51582 365 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 RGS8P57771 180 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 TGFBR3Q03167 851 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 EGR4Q05215 589 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 RBBP4Q09028 425 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 BNIP2Q12982 314 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 PIN1Q13526 163 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 CYP51A1Q16850 503 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 RUNDC3AQ59EK9 446 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 CT83Q5H943 113 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 COQ5Q5HYK3 327 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 ALG10BQ5I7T1 473 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 ABHD12BQ7Z5M8 362 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 NET1Q7Z628 596 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 COMTD1Q86VU5 262 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 RANBP3LQ86VV4 465 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 ARMC8Q8IUR7 673 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 SLC30A8Q8IWU4 369 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 TMEM99Q8N816 258 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 LINC00482Q8N8I6 264 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 POMGNT2Q8NAT1 580 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 KBTBD8Q8NFY9 601 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 MFSD8Q8NHS3 518 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 TMEM171Q8WVE6 324 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 AKAP1Q92667 903 aaKnown RBP eCLIP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 SLC38A4Q969I6 547 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 THOC1Q96FV9 657 aaKnown RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 RADILQ96JH8 1075 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 CGREF1Q99674 301 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 PTDSS2Q9BVG9 487 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 TMEM120AQ9BXJ8 343 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 TRIM2Q9C040 744 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 SLCO5A1Q9H2Y9 848 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF701Q9NV72 531 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-223ENST00000545440 NPAP1Q9NZP6 1156 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 RPS6KB2Q9UBS0 482 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 SLC13A4Q9UKG4 626 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 RASD1Q9Y272 281 aa6.74□□□□□ -1.33
SNHG1-223ENST00000545440 ZFHX3Q15911 3703 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 NAV3Q8IVL0 2385 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 A0A0B4J2E0 115 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 A0A1B0GWA3 101 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 A0A1B0GX12 115 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 CIB4A0PJX0 185 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 OR6C65A6NJZ3 312 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 CCT8L1PA6NM43 557 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 BBIP1A8MTZ0 92 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 CLOCKO15516 846 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 OR2T1O43869 369 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 TPST1O60507 370 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 FMO6PO60774 539 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 MFN2O95140 757 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 PTAFRP25105 342 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 MPGP29372 298 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 AQP1P29972 269 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 PCGF2P35227 344 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 MTPNP58546 118 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 RPS4XP62701 263 aaKnown RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 HOXC5Q00444 222 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 DMTNQ08495 405 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 NFYCQ13952 458 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 GABRA6Q16445 453 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 TRMT5Q32P41 509 aaKnown RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF672Q499Z4 452 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 GLIPR1L2Q4G1C9 344 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 FAM69AQ5T7M9 428 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 TSPO2Q5TGU0 170 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 TMEM225Q6GV28 225 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 ULK3Q6PHR2 472 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 KLHL17Q6TDP4 642 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 TMEM108Q6UXF1 575 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms