RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 SMU1Q2TAY7 513 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 ALKBH6Q3KRA9 238 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 LIN52Q52LA3 116 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 TMEM154Q6P9G4 183 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 DOK3Q7L591 496 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 RETREG3Q86VR2 466 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 RNF130Q86XS8 419 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 MNS1Q8NEH6 495 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 LRRC58Q96CX6 371 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 ZNF75AQ96N20 296 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 OR2M2Q96R28 347 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 GPA33Q99795 319 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 SLITRK2Q9H156 845 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 HINT3Q9NQE9 182 aaKnown RBP12.46□□□□□ -0.41
COPS7A-220ENST00000544725 B3GAT1Q9P2W7 334 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 SLC7A8Q9UHI5 535 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 OPN4Q9UHM6 478 aa12.46□□□□□ -0.41
COPS7A-220ENST00000544725 DNAJC9-AS1A6NH13 148 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 CLDN25C9JDP6 229 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 AIM2O14862 343 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 CRYBB2P43320 205 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 RPS5P46782 204 aaKnown RBP12.45□□□□□ -0.42
COPS7A-220ENST00000544725 RAB1AP62820 205 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 CASP8Q14790 479 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 OCLNQ16625 522 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 ATG16L1Q676U5 607 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 RGS7BPQ6MZT1 257 aaPredicted RBP12.45□□□□□ -0.42
COPS7A-220ENST00000544725 ZNF813Q6ZN06 617 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 SNX32Q86XE0 403 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 TMEM123Q8N131 208 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 C17orf53Q8N3J3 647 aaPredicted RBP12.45□□□□□ -0.42
COPS7A-220ENST00000544725 TRIML2Q8N7C3 387 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 SYT14Q8NB59 555 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 OR52P1PQ8NH57 321 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 SNX33Q8WV41 574 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 TIMD4Q96H15 378 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 DUX5Q96PT3 197 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 PTDSS2Q9BVG9 487 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 C1QTNF5Q9BXJ0 243 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 PPCSQ9HAB8 311 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 B3GAT2Q9NPZ5 323 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 NKIRAS2Q9NYR9 191 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 TAAR3PQ9P1P4 343 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 ZDHHC2Q9UIJ5 367 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 POFUT2Q9Y2G5 429 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 WIPI2Q9Y4P8 454 aa12.45□□□□□ -0.42
COPS7A-220ENST00000544725 IGHV1-69-2A0A0G2JMI3 117 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 SLC22A23A1A5C7 686 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 UBL3O95164 117 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 NUDT17P0C025 328 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 GIPRP48546 466 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 BAMBIQ13145 260 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 CHI3L2Q15782 390 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 PHYHD1Q5SRE7 291 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 ZNF836Q6ZNA1 936 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 ZNF627Q7L945 461 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 VRK2Q86Y07 508 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 IFT20Q8IY31 132 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 C20orf196Q8IYI0 205 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 RAB1CQ92928 201 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 TESCQ96BS2 214 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 LRR1Q96L50 414 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 ZIM3Q96PE6 472 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 MECRQ9BV79 373 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 TXLNGYQ9BZA5 131 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 SLCO1C1Q9NYB5 712 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 ARMCX1Q9P291 453 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 SEC14L4Q9UDX3 406 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 ZNF281Q9Y2X9 895 aa12.44□□□□□ -0.42
COPS7A-220ENST00000544725 LOC102725191A0A1B0GVB3 256 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 SMIM23A6NLE4 172 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 M0R082 166 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 TRAF3IP2O43734 574 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-220ENST00000544725 OR2T1O43869 369 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 FZD7O75084 574 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 C1QCP02747 245 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 RNASE1P07998 156 aaKnown RBP12.43□□□□□ -0.42
COPS7A-220ENST00000544725 FAM153BP0C7A2 387 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 PRG2P13727 222 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 B4GALT1P15291 398 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 CLNS1AP54105 237 aaKnown RBP12.43□□□□□ -0.42
COPS7A-220ENST00000544725 KLF3P57682 345 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-220ENST00000544725 CAMK2DQ13557 499 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 DPY19L1Q2PZI1 675 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 TUSC1Q2TAM9 212 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 HFEQ30201 348 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 ARMCX4Q5H9R4 360 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 SPANXN4Q5MJ08 99 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 RNF220Q5VTB9 566 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 CARD17Q5XLA6 110 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 H1FNTQ75WM6 255 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-220ENST00000544725 ZNF417Q8TAU3 575 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 ANP32BQ92688 251 aaKnown RBP12.43□□□□□ -0.42
COPS7A-220ENST00000544725 POP5Q969H6 163 aaKnown RBP12.43□□□□□ -0.42
COPS7A-220ENST00000544725 SLC25A28Q96A46 364 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 KTI12Q96EK9 354 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-220ENST00000544725 CCDC115Q96NT0 180 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 ZNF587Q96SQ5 575 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-220ENST00000544725 GAL3ST1Q99999 423 aa12.43□□□□□ -0.42
COPS7A-220ENST00000544725 ARMC7Q9H6L4 198 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms