RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 RBM4Q9BWF3 364 aaKnown RBP17.13■□□□□ 0.33
LPCAT3-211ENST00000543794 ZNF275Q9NSD4 429 aaPredicted RBP17.13■□□□□ 0.33
LPCAT3-211ENST00000543794 SLC6A13Q9NSD5 602 aa17.13■□□□□ 0.33
LPCAT3-211ENST00000543794 IFT52Q9Y366 437 aa17.13■□□□□ 0.33
LPCAT3-211ENST00000543794 TRAV20A0A0B4J274 112 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 A0A0G2JPF8 293 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 HNRNPCL2B2RXH8 293 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 HNRNPCL3B7ZW38 293 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 M0R082 166 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 M0R3G1 203 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 RFXANKO14593 260 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 TRAF3IP2O43734 574 aaPredicted RBP17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 AKAP8O43823 692 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 HNRNPCL1O60812 293 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 HNRNPCL4P0DMR1 293 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 CD79AP11912 226 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 CRATP43155 626 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 PIGFQ07326 219 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 FXNQ16595 210 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 TRMT5Q32P41 509 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 RPS26P11Q5JNZ5 115 aaPredicted RBP17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 FAM69AQ5T7M9 428 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 THSD4Q6ZMP0 1018 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 NET1Q7Z628 596 aaPredicted RBP17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 LRP11Q86VZ4 500 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 TEX29Q8N6K0 151 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 ZNF417Q8TAU3 575 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 LRR1Q96L50 414 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 ZNF587Q96SQ5 575 aaPredicted RBP17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 C12orf10Q9HB07 376 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 NOX1Q9Y5S8 564 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 GPR45Q9Y5Y3 372 aa17.12■□□□□ 0.33
LPCAT3-211ENST00000543794 MS4A18H0YCH9 400 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 PPIHO43447 177 aaKnown RBP17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 AVPP01185 164 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 EPHA1P21709 976 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 GRPRP30550 384 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 DSTNP60981 165 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 HOXC5Q00444 222 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 MYBPC1Q00872 1141 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 MS4A18Q3C1V0 323 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 C5orf46Q6UWT4 87 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 GLB1L3Q8NCI6 653 aaPredicted RBP17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 TMEM19Q96HH6 336 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 JMJD8Q96S16 334 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 ZNF416Q9BWM5 594 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 DENND2DQ9H6A0 471 aaPredicted RBP17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 TPT1P8Q9HAU6 139 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 PNPOQ9NVS9 261 aa17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 MYEF2Q9P2K5 600 aaKnown RBP17.11■□□□□ 0.33
LPCAT3-211ENST00000543794 RP2O75695 350 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 PNPP00491 289 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 ZCCHC18P0CG32 403 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 ANPEPP15144 967 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 LIMS1P48059 325 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 RPS23P62266 143 aaKnown RBP17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 MAD2L1BPQ15013 274 aaPredicted RBP17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 ZNF311Q5JNZ3 666 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 GKAP1Q5VSY0 366 aaPredicted RBP17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 NHLRC1Q6VVB1 395 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 ZNF813Q6ZN06 617 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 ADPRHL1Q8NDY3 354 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 SLC38A4Q969I6 547 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 ZBTB18Q99592 522 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 ZNF385DQ9H6B1 395 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 CACYBPQ9HB71 228 aaKnown RBP17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 G6PC2Q9NQR9 355 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 THUMPD1Q9NXG2 353 aaKnown RBP17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 ZNF224Q9NZL3 707 aa17.1■□□□□ 0.33
LPCAT3-211ENST00000543794 SDHDO14521 159 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 NCR1O76036 304 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 HPRP00739 348 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 NAT2P11245 290 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 HLA-DOBP13765 273 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 GIPRP48546 466 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 AQP5P55064 265 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 RAB1AP62820 205 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 GALK2Q01415 458 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 MFSD13AQ14CX5 517 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 CARD17Q5XLA6 110 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 UEVLDQ8IX04 471 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 LSMEM1Q8N8F7 131 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 EMC6Q9BV81 110 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 BCL2L10Q9HD36 194 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 DUSP13Q9UII6 198 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 ZNF346Q9UL40 294 aaKnown RBP17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 FZR1Q9UM11 496 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 POFUT2Q9Y2G5 429 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 TRRAPQ9Y4A5 3859 aa17.09■□□□□ 0.33
LPCAT3-211ENST00000543794 IGKV1D-42A0A075B6H8 117 aa17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 TRAV36DV7A0A075B6V5 113 aa17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 LOC105371242A0A075B767 164 aa17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 TMEM247A6NEH6 219 aa17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 IL6P05231 212 aa17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 PTDSS1P48651 473 aaKnown RBP17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 ACSM5Q6NUN0 579 aa17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 SLC41A3Q96GZ6 507 aa17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 B3GAT2Q9NPZ5 323 aa17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 SLC52A3Q9NQ40 469 aa17.08■□□□□ 0.32
LPCAT3-211ENST00000543794 KLHL14Q9P2G3 628 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms