RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LONP1P36776 959 aaKnown RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 ETV5P41161 510 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 UQCRFS1P47985 274 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 CENPFP49454 3210 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 SERPINB8P50452 374 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 ELF3P78545 371 aaPredicted RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 C2orf54Q08AI8 447 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF154Q13106 437 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 PNOCQ13519 176 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF77Q15935 545 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 NDUFA5Q16718 116 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 CYP51A1Q16850 503 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 FER1L6Q2WGJ9 1857 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 TEX44Q53QW1 395 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 SPECC1LQ69YQ0 1117 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF324BQ6AW86 544 aaPredicted RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 FAM199XQ6PEV8 388 aaPredicted RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 LRRC74BQ6ZQY2 392 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 SMIM29Q86T20 159 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 RNF130Q86XS8 419 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 MARCH9Q86YJ5 346 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 DDX60Q8IY21 1712 aaKnown RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 LINC00469Q8N7U9 141 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 CATSPER1Q8NEC5 780 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 B3GNT7Q8NFL0 401 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 OR9A4Q8NGU2 314 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 MRGPRDQ8TDS7 321 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 MITD1Q8WV92 249 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 TRUB1Q8WWH5 349 aaKnown RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 CRYGNQ8WXF5 182 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 MRPS31Q92665 395 aaKnown RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 ATXN7L3BQ96GX2 97 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 CATSPER2Q96P56 530 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 RNF2Q99496 336 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 P2RY13Q9BPV8 354 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 IL22Q9GZX6 179 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 SMYD3Q9H7B4 428 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 C8orf33Q9H7E9 229 aaPredicted RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 NIPAL2Q9H841 368 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 PARVBQ9HBI1 364 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 LYRM4Q9HD34 91 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 SAMSN1Q9NSI8 373 aaKnown RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 CUTCQ9NTM9 273 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 NUDT15Q9NV35 164 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 EHFQ9NZC4 300 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 NUDT4Q9NZJ9 180 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 WRAP73Q9P2S5 460 aaPredicted RBP3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 MLXQ9UH92 298 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 NUP50Q9UKX7 468 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 RARRES3Q9UL19 164 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 TFR2Q9UP52 801 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 GAB2Q9UQC2 676 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 FADS3Q9Y5Q0 445 aa3.23□□□□□ -1.89
SFSWAP-211ENST00000542813 MRC1P22897 1456 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF609O15014 1411 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ITGB4P16144 1822 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 A0A0J9YYE9 177 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 LOC100506127A0A0U1RQW1 187 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 A0A1B0GUV1 79 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 TEX48A0A1B0GUV7 120 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF233A6NK53 670 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 PP2D1A8MPX8 630 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ARHGEF33A8MVX0 844 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 TRDCB7Z8K6 153 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 E7ENQ6 273 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 HIP1O00291 1037 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 TFECO14948 347 aaPredicted RBP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 IDH3BO43837 385 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 PRKYO43930 277 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 OR10H3O60404 316 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF254O75437 659 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 SUPT3HO75486 399 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 YEATS4O95619 227 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 TGM6O95932 706 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 TRBC1P01850 177 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 MBP02144 154 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 GYPCP04921 128 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 CLTAP09496 248 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 STAG3L2P0CL84 134 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 PVRP15151 417 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF43P17038 809 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 PTNP21246 168 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 CMA1P23946 247 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 IGFBP5P24593 272 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 HMOX2P30519 316 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 CHRNB4P30926 498 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 RRM2P31350 389 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ACVR1BP36896 505 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 OPRD1P41143 372 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 XCR1P46094 333 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 DAP3P51398 398 aaKnown RBP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 PRKXP51817 358 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ARHGDIAP52565 204 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 YWHAGP61981 247 aaKnown RBP eCLIP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 SRPXP78539 464 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 FKBP3Q00688 224 aaKnown RBP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 DR1Q01658 176 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 IRF8Q02556 426 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 PPIL2Q13356 520 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms