RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 REEP3Q6NUK4 255 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 CFAP161Q6P656 301 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 IL20RBQ6UXL0 311 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 LRRC74BQ6ZQY2 392 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 EIF3MQ7L2H7 374 aaKnown RBP3.97□□□□□ -1.77
MDM2-228ENST00000542502 DHDDSQ86SQ9 333 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 PATL1Q86TB9 770 aaKnown RBP3.97□□□□□ -1.77
MDM2-228ENST00000542502 ANKRD46Q86W74 232 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 FUNDC1Q8IVP5 155 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 PEX5LQ8IYB4 626 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 C10orf67Q8IYJ2 551 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 KIF2BQ8N4N8 673 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 ZFP62Q8NB50 900 aaPredicted RBP3.97□□□□□ -1.77
MDM2-228ENST00000542502 C11orf65Q8NCR3 313 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 MDS2Q8NDY4 140 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 FAM110BQ8TC76 370 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 ZFP90Q8TF47 636 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 FAR1Q8WVX9 515 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 VPS33AQ96AX1 596 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 OMA1Q96E52 524 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 SCMH1Q96GD3 660 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 MAGED4Q96JG8 741 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 TEX37Q96LM6 180 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 ZNF597Q96LX8 424 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 ANKRD27Q96NW4 1050 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 CGREF1Q99674 301 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 TREX2Q9BQ50 279 aaPredicted RBP3.97□□□□□ -1.77
MDM2-228ENST00000542502 ECSITQ9BQ95 431 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 DOHHQ9BU89 302 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 THUMPD3Q9BV44 507 aaKnown RBP3.97□□□□□ -1.77
MDM2-228ENST00000542502 IFT27Q9BW83 186 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 ITPAQ9BY32 194 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 ANGPTL4Q9BY76 406 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 NXF5Q9H1B4 397 aaKnown RBP3.97□□□□□ -1.77
MDM2-228ENST00000542502 C1orf21Q9H246 121 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 TMEM38AQ9H6F2 299 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 IL1RL2Q9HB29 575 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 A4GALTQ9NPC4 353 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 EQTNQ9NQ60 294 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 PCDHB16Q9NRJ7 776 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 KLHL28Q9NXS3 571 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 KLRF1Q9NZS2 232 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 ZNF223Q9UK11 482 aaPredicted RBP3.97□□□□□ -1.77
MDM2-228ENST00000542502 TP53TG5Q9Y2B4 290 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 SLC35A3Q9Y2D2 325 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 WDR45Q9Y484 360 aa3.97□□□□□ -1.77
MDM2-228ENST00000542502 UBR5O95071 2799 aaPredicted RBP3.97□□□□□ -1.77
MDM2-228ENST00000542502 LRRK2Q5S007 2527 aa3.96□□□□□ -1.77
MDM2-228ENST00000542502 TNRC6AQ8NDV7 1962 aaKnown RBP3.96□□□□□ -1.77
MDM2-228ENST00000542502 EXPH5Q8NEV8 1989 aa3.96□□□□□ -1.77
MDM2-228ENST00000542502 NBASA2RRP1 2371 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 IGLV3-32A0A0A0MS00 114 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 TEX13CA0A0J9YWL9 993 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 LOC100653049A0A140TA62 436 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 HTR3EA5X5Y0 456 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 ASPDHA6ND91 283 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 MRASO14807 208 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 TSPAN2O60636 221 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 HCN1O60741 890 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 KRT34O76011 436 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 OR6B1O95007 311 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 KCNK2O95069 426 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 NADKO95544 446 aaPredicted RBP3.96□□□□□ -1.78
MDM2-228ENST00000542502 CLPSP04118 112 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 DBIP07108 87 aaKnown RBP3.96□□□□□ -1.78
MDM2-228ENST00000542502 FCGR1AP12314 374 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 ETS2P15036 469 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 ZNF24P17028 368 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 IL12AP29459 219 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 IFNA8P32881 189 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 EVI2BP34910 448 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 PTGER4P35408 488 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 CASP3P42574 277 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 SLC6A8P48029 635 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 ATP12AP54707 1039 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 DSCR4P56555 118 aaPredicted RBP3.96□□□□□ -1.78
MDM2-228ENST00000542502 SELENOVP59797 346 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 ZP1P60852 638 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 DSTNP60981 165 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 SEC61A1P61619 476 aaKnown RBP3.96□□□□□ -1.78
MDM2-228ENST00000542502 EEF1A1P68104 462 aaKnown RBP3.96□□□□□ -1.78
MDM2-228ENST00000542502 PLGLB1Q02325 96 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 SLC10A1Q14973 349 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 RGNQ15493 299 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 ZNF141Q15928 474 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 DUSP5Q16690 384 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 CYP51A1Q16850 503 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 KRTAP24-1Q3LI83 254 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 GPAT3Q53EU6 434 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 ALG10Q5BKT4 473 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 ALG10BQ5I7T1 473 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 SAMD4BQ5PRF9 694 aaKnown RBP3.96□□□□□ -1.78
MDM2-228ENST00000542502 DCST2Q5T1A1 773 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 EEF1A1P5Q5VTE0 462 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 TIGD3Q6B0B8 471 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 CGB2Q6NT52 195 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 ARHGAP11AQ6P4F7 1023 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 AAGABQ6PD74 315 aa3.96□□□□□ -1.78
MDM2-228ENST00000542502 DLEU7Q6UYE1 221 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms