RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 A0A1W2PR80 420 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 SLC35F4A4IF30 521 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 CLOCKO15516 846 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 UMPSP11172 480 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 HSD17B1P14061 328 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 SLC25A3Q00325 362 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 FXNQ16595 210 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 SAMD4BQ5PRF9 694 aaKnown RBP17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 C16orf89Q6UX73 402 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 OFCC1Q8IZS5 231 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 RNF148Q8N7C7 305 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 CCDC197Q8NCU1 140 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 LILRB1Q8NHL6 650 aaPredicted RBP17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 PFN4Q8NHR9 129 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 SGTBQ96EQ0 304 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 EMC6Q9BV81 110 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 FNDC11Q9BVV2 318 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 GORASP2Q9H8Y8 452 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 GPR35Q9HC97 309 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 MED29Q9NX70 200 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 ADAM21Q9UKJ8 722 aa17.6■□□□□ 0.41
CACNA2D4-215ENST00000542340 ZNF726A6NNF4 738 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 C11orf98E9PRG8 122 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 OR7A10O76100 309 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 WNT11O96014 354 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 HOXB1P14653 301 aaPredicted RBP17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 FUT1P19526 365 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 PAX7P23759 505 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 PTAFRP25105 342 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 YAP1P46937 504 aaKnown RBP17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 ZNF83P51522 516 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 TBRG1Q3YBR2 411 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 HIKESHIQ53FT3 197 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 ANKRD16Q6P6B7 361 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 KLHL24Q6TFL4 600 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 NANOGNBQ7Z5D8 188 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 C20orf196Q8IYI0 205 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 MAGEE2Q8TD90 523 aaPredicted RBP17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 LIPHQ8WWY8 451 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 BCL2L2Q92843 193 aaPredicted RBP17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 RADILQ96JH8 1075 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 CDRT15Q96T59 188 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 CCL19Q99731 98 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 CRLF2Q9HC73 371 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 C20orf141Q9NUB4 165 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 DCAF13Q9NV06 445 aaKnown RBP17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 CD300AQ9UGN4 299 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 SAMD4AQ9UPU9 718 aaKnown RBP17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 MGAT4BQ9UQ53 548 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 HIVEP1P15822 2718 aa17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 RAI1Q7Z5J4 1906 aaPredicted RBP17.59■□□□□ 0.41
CACNA2D4-215ENST00000542340 CADP27708 2225 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 PRRC2AP48634 2157 aaKnown RBP17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 FFAR1O14842 300 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 RNF13O43567 381 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 IFNGR1P15260 489 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 MXRA7P84157 204 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 FOXD4Q12950 439 aaPredicted RBP17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 SPATS1Q496A3 300 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 ZNF672Q499Z4 452 aaPredicted RBP17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 SLC35D2Q76EJ3 337 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 FAM156AQ8NDB6 213 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 ADAD1Q96M93 576 aaKnown RBP17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 C1QTNF6Q9BXI9 259 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 MAGEL2Q9UJ55 1249 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 ENPP4Q9Y6X5 453 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 ITPR3Q14573 2671 aa17.58■□□□□ 0.4
CACNA2D4-215ENST00000542340 ALPK2Q86TB3 2170 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 BLOC1S5-TXNDC5H3BN57 136 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 J3KTA2 159 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 M0R3G1 203 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 ABCD4O14678 606 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 TMCC2O75069 709 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 SERPINI2O75830 405 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 TCN1P20061 433 aaPredicted RBP17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 CD40P25942 277 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 BIDP55957 195 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 ARF1P84077 181 aaKnown RBP17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 TRAM2Q15035 370 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 CEACAM16Q2WEN9 425 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 CARD17Q5XLA6 110 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 CYP4Z1Q86W10 505 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 DEFB107AQ8IZN7 70 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 KBTBD8Q8NFY9 601 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 OR6X1Q8NH79 312 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 IGFBPL1Q8WX77 278 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 FBXW5Q969U6 566 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 NSL1Q96IY1 281 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 B3GAT2Q9NPZ5 323 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 MAN2C1Q9NTJ4 1040 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 RHCGQ9UBD6 479 aa17.57■□□□□ 0.4
CACNA2D4-215ENST00000542340 F8P00451 2351 aa17.56■□□□□ 0.4
CACNA2D4-215ENST00000542340 ARPC4-TTLL3A0A0A6YYG9 625 aa17.56■□□□□ 0.4
CACNA2D4-215ENST00000542340 ZNF99A8MXY4 864 aaPredicted RBP17.56■□□□□ 0.4
CACNA2D4-215ENST00000542340 SHISA9B4DS77 424 aa17.56■□□□□ 0.4
CACNA2D4-215ENST00000542340 M0R1B8 84 aa17.56■□□□□ 0.4
CACNA2D4-215ENST00000542340 SMPD2O60906 423 aa17.56■□□□□ 0.4
CACNA2D4-215ENST00000542340 PRSS23O95084 383 aa17.56■□□□□ 0.4
CACNA2D4-215ENST00000542340 TSPAN19P0C672 248 aa17.56■□□□□ 0.4
CACNA2D4-215ENST00000542340 FUT4P22083 530 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms