RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ZNF229Q9UJW7 825 aa8.53□□□□□ -1.04
YBX3-212ENST00000542002 A0A087WUU8 490 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 A0A096LPE4 126 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 A0A1W2PPZ6 126 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 ZNF503-AS2A6NEH8 195 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 BLOC1S5-TXNDC5H3BN57 136 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 RPL36A-HNRNPH2H7BZ11 118 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 hCG_2039718K7EN88 272 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 M0R3G1 203 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 ARPC2O15144 300 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 F13BP05160 661 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 ZNF83P51522 516 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 ARF1P84077 181 aaKnown RBP8.52□□□□□ -1.05
YBX3-212ENST00000542002 ROR2Q01974 943 aaKnown RBP8.52□□□□□ -1.05
YBX3-212ENST00000542002 RUNX1T1Q06455 604 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 RPL18Q07020 188 aaKnown RBP8.52□□□□□ -1.05
YBX3-212ENST00000542002 ST3GAL3Q11203 375 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 CAMK2DQ13557 499 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 ACKR1Q16570 336 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 SAMD4BQ5PRF9 694 aaKnown RBP8.52□□□□□ -1.05
YBX3-212ENST00000542002 OR7E24Q6IFN5 339 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 LRFN4Q6PJG9 635 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 C16orf89Q6UX73 402 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 ZNF704Q6ZNC4 412 aaPredicted RBP8.52□□□□□ -1.05
YBX3-212ENST00000542002 PIK3C3Q8NEB9 887 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 OR1K1Q8NGR3 316 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 BCAS4Q8TDM0 211 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 IGFBPL1Q8WX77 278 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 MUCL1Q96DR8 90 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 SGTBQ96EQ0 304 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 HS6ST2Q96MM7 605 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 USB1Q9BQ65 265 aaKnown RBP8.52□□□□□ -1.05
YBX3-212ENST00000542002 FUZQ9BT04 418 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 FNDC11Q9BVV2 318 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 UBTD1Q9HAC8 227 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 CRLF2Q9HC73 371 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 TAS2R1Q9NYW7 299 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 RCE1Q9Y256 329 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 NOX1Q9Y5S8 564 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 ENPP4Q9Y6X5 453 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 V9GYQ6 96 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 SPG11Q96JI7 2443 aa8.52□□□□□ -1.05
YBX3-212ENST00000542002 TRBV4-1A0A0J9YWV2 114 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 SHISA9B4DS77 424 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 ZNF587BE7ETH6 402 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 CDC42EP2O14613 210 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 CLOCKO15516 846 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 RNF13O43567 381 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 SLC43A1O75387 559 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 KRT33AO76009 404 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 IGF2P01344 180 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 RAF1P04049 648 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 UMPSP11172 480 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 ZNF26P17031 533 aaPredicted RBP8.51□□□□□ -1.05
YBX3-212ENST00000542002 CALB2P22676 271 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 NR1H2P55055 460 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 BIDP55957 195 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 TUBA1BP68363 451 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 TUBA4AP68366 448 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 MXRA7P84157 204 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 PRKCDQ05655 676 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 SPOCK1Q08629 439 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 MELKQ14680 651 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 TRAM2Q15035 370 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 SEC23BQ15437 767 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 CEACAM16Q2WEN9 425 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 PODNL1Q6PEZ8 512 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 CYP2R1Q6VVX0 501 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 TUBA1AQ71U36 451 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 SLC35D2Q76EJ3 337 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 NRMQ8IXM6 262 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 OFCC1Q8IZS5 231 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 LRRC75AQ8NAA5 344 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 C1orf162Q8NEQ5 155 aaPredicted RBP8.51□□□□□ -1.05
YBX3-212ENST00000542002 SLC7A13Q8TCU3 470 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 AKAP1Q92667 903 aaKnown RBP eCLIP8.51□□□□□ -1.05
YBX3-212ENST00000542002 NINJ1Q92982 152 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 TMEM54Q969K7 222 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 BPIFA2Q96DR5 249 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 PYURFQ96I23 114 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 CLPTM1LQ96KA5 538 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 LRR1Q96L50 414 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 TNFRSF13CQ96RJ3 184 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 RPS6KA6Q9UK32 745 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 MED31Q9Y3C7 131 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
YBX3-212ENST00000542002 ABCA4P78363 2273 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 TCRBV5S2A0A599 114 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 OR6C65A6NJZ3 312 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 ZNF726A6NNF4 738 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 SEC14L2O76054 403 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 PDE5AO76074 875 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 UBOX5O94941 541 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 OR6A2O95222 327 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 HIST1H2ABP04908 130 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 IFI30P13284 250 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 RHCEP18577 417 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 ATP6V1B2P21281 511 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 DNASE1P24855 282 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 CD40P25942 277 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms