RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CHATP28329 748 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 PTPN6P29350 595 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 CHRNB4P30926 498 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 SRD5A2P31213 254 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 EVI2BP34910 448 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 ZFP36L2P47974 494 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 RFX3P48380 749 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 TRPC1P48995 793 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 CCT3P49368 545 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 DIO3P55073 304 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 F2RL1P55085 397 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 DSCR4P56555 118 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 C21orf58P58505 322 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 ZP1P60852 638 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 EEF1A1P68104 462 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 ADORA2A-AS1P86434 159 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 LRRC74AQ0VAA2 488 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 BST1Q10588 318 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 BNIP1Q12981 228 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 RCAN2Q14206 197 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 GANABQ14697 944 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF630Q2M218 657 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 GLYR1Q49A26 553 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 NHSL2Q5HYW2 709 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 C6orf141Q5SZD1 244 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 C1orf185Q5T7R7 199 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 EEF1A1P5Q5VTE0 462 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 C3P1Q6ZMU1 363 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 IFNEQ86WN2 208 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 CHERPQ8IWX8 916 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 COX18Q8N8Q8 333 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 SCCPDHQ8NBX0 429 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 FAM83FQ8NEG4 500 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 OR7A2PQ8NGA2 310 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 OR4K17Q8NGC6 315 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 OR14L1PQ8NHC6 308 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 LILRB4Q8NHJ6 448 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 GOT1L1Q8NHS2 421 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 ABTB1Q969K4 478 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 SLC25A28Q96A46 364 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 EFHD2Q96C19 240 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 PGAM5Q96HS1 289 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 PPP1R36Q96LQ0 422 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 WDFY2Q96P53 400 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 STACQ99469 402 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 SORT1Q99523 831 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 ZBTB18Q99592 522 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 TTYH2Q9BSA4 534 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 POLDIP3Q9BY77 421 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 TBL1XR1Q9BZK7 514 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 UBQLN3Q9H347 655 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 MMADHCQ9H3L0 296 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 MEAF6Q9HAF1 191 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 SCPEP1Q9HB40 452 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 RANGRFQ9HD47 186 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 KRCC1Q9NPI7 259 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 KCNJ16Q9NPI9 418 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 EQTNQ9NQ60 294 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 CYSLTR2Q9NS75 346 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 PNPLA3Q9NST1 481 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 SIRT3Q9NTG7 399 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 INTS9Q9NV88 658 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 FAM120CQ9NX05 1096 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 DKKL1Q9UK85 242 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 PAIP2BQ9ULR5 123 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 ADAM18Q9Y3Q7 739 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 WIF1Q9Y5W5 379 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 LIPGQ9Y5X9 500 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 CEPT1Q9Y6K0 416 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 USH1CQ9Y6N9 552 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 SVILO95425 2214 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 MYO7BQ6PIF6 2116 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 SPENQ96T58 3664 aaKnown RBP4.81□□□□□ -1.64
CPSF7-220ENST00000541963 PRSS51A0A1B0GVH4 220 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 H3BNH8 94 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 KLF11O14901 512 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 ZNHIT1O43257 154 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 SCO2O43819 266 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 FADS1O60427 444 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 SNX3O60493 162 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 DIAPH2O60879 1101 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 SNNO75324 88 aaPredicted RBP4.81□□□□□ -1.64
CPSF7-220ENST00000541963 UTS2O95399 124 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 CPSF4O95639 269 aaKnown RBP4.81□□□□□ -1.64
CPSF7-220ENST00000541963 C6orf47O95873 294 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 EPPINO95925 133 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 AK1P00568 194 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 HMGN2P05204 90 aaKnown RBP4.81□□□□□ -1.64
CPSF7-220ENST00000541963 PRF1P14222 555 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 COX6B1P14854 86 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 CPN1P15169 458 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 ARSBP15848 533 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 IL7RP16871 459 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 DPP4P27487 766 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 ARRB2P32121 409 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 DCTDP32321 178 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 S100A3P33764 101 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 TIMP3P35625 211 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 DCTP40126 519 aa4.81□□□□□ -1.64
CPSF7-220ENST00000541963 VHLP40337 213 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms