RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 RASD2Q96D21 266 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 LDAHQ9H6V9 325 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 ACOT13Q9NPJ3 140 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 CORINQ9Y5Q5 1042 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 COMMD3-BMI1R4GMX3 469 aa24.92■■□□□ 1.58
CCM2-218ENST00000541586 LIPT2A6NK58 231 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 PLPP3O14495 311 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 ADORA3P0DMS8 318 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 FKBP2P26885 142 aaKnown RBP24.91■■□□□ 1.58
CCM2-218ENST00000541586 HTR1FP30939 366 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.91■■□□□ 1.58
CCM2-218ENST00000541586 WIPI1Q5MNZ9 446 aaPredicted RBP24.91■■□□□ 1.58
CCM2-218ENST00000541586 GTF2IRD2BQ6EKJ0 949 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 NIPAL3Q6P499 406 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 GPR141Q7Z602 305 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 GTF2IRD2Q86UP8 949 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 MUL1Q969V5 352 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 RNFT2Q96EX2 444 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 Q96M85 177 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 MRPS18AQ9NVS2 196 aaKnown RBP24.91■■□□□ 1.58
CCM2-218ENST00000541586 NDUFA13Q9P0J0 144 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 NCKAP5O14513 1909 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 FREM3P0C091 2139 aa24.91■■□□□ 1.58
CCM2-218ENST00000541586 KALRNO60229 2985 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 OR2M5A3KFT3 312 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 C11orf98E9PRG8 122 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 ZNF17P17021 662 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 SHC1P29353 583 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 C19orf57Q0VDD7 668 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 GLYR1Q49A26 553 aaPredicted RBP24.9■■□□□ 1.58
CCM2-218ENST00000541586 CPT1CQ8TCG5 803 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 LGALS12Q96DT0 336 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 TMEM80Q96HE8 168 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 TUBA1CQ9BQE3 449 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 CDCA4Q9BXL8 241 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 EXO5Q9H790 373 aa24.9■■□□□ 1.58
CCM2-218ENST00000541586 TEX13CA0A0J9YWL9 993 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 RNF13O43567 381 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 INMTO95050 263 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 PAICSP22234 425 aaKnown RBP24.89■■□□□ 1.58
CCM2-218ENST00000541586 ACVR2AP27037 513 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 GTF2E2P29084 291 aaKnown RBP24.89■■□□□ 1.58
CCM2-218ENST00000541586 SDHAP31040 664 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 SFTPDP35247 375 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 DBPQ10586 325 aaPredicted RBP24.89■■□□□ 1.58
CCM2-218ENST00000541586 IRF3Q14653 427 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 KLHL22Q53GT1 634 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 OR52I1Q8NGK6 324 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 OR5B2Q96R09 309 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 PIGQQ9BRB3 760 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 ZDHHC11Q9H8X9 412 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 TAS2R16Q9NYV7 291 aa24.89■■□□□ 1.58
CCM2-218ENST00000541586 IMPA2O14732 288 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 OR6A2O95222 327 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 TXNDC12O95881 172 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 AHCYP23526 432 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 CLK1P49759 484 aaKnown RBP24.89■■□□□ 1.57
CCM2-218ENST00000541586 RAB40BQ12829 278 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 TBCEQ15813 527 aaPredicted RBP24.89■■□□□ 1.57
CCM2-218ENST00000541586 TMEM176BQ3YBM2 270 aaPredicted RBP24.89■■□□□ 1.57
CCM2-218ENST00000541586 SOWAHCQ53LP3 525 aaPredicted RBP24.89■■□□□ 1.57
CCM2-218ENST00000541586 MEPCEQ7L2J0 689 aaKnown RBP24.89■■□□□ 1.57
CCM2-218ENST00000541586 SCAIQ8N9R8 606 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 NPEPL1Q8NDH3 523 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 DTNBP1Q96EV8 351 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 TSPAN32Q96QS1 320 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 NMNAT3Q96T66 252 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 RBM38Q9H0Z9 239 aaKnown RBP24.89■■□□□ 1.57
CCM2-218ENST00000541586 INIPQ9NRY2 104 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 ALKBH4Q9NXW9 302 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 GRHPRQ9UBQ7 328 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 LIPGQ9Y5X9 500 aa24.89■■□□□ 1.57
CCM2-218ENST00000541586 A0A1W2PNR3 127 aa24.88■■□□□ 1.57
CCM2-218ENST00000541586 FZD7O75084 574 aa24.88■■□□□ 1.57
CCM2-218ENST00000541586 H1FNTQ75WM6 255 aaPredicted RBP24.88■■□□□ 1.57
CCM2-218ENST00000541586 SIAH3Q8IW03 269 aa24.88■■□□□ 1.57
CCM2-218ENST00000541586 RORBQ92753 470 aa24.88■■□□□ 1.57
CCM2-218ENST00000541586 DDOQ99489 341 aa24.88■■□□□ 1.57
CCM2-218ENST00000541586 SLC6A15Q9H2J7 730 aa24.88■■□□□ 1.57
CCM2-218ENST00000541586 QPCTLQ9NXS2 382 aa24.88■■□□□ 1.57
CCM2-218ENST00000541586 SVILO95425 2214 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 ZNF99A8MXY4 864 aaPredicted RBP24.87■■□□□ 1.57
CCM2-218ENST00000541586 SERPINI2O75830 405 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 APOL3O95236 402 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 HPNP05981 417 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 CLUP10909 449 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 B3GALT5-AS1P59052 145 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 KLHL12Q53G59 568 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 OR13F1Q8NGS4 319 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 OR51V1Q9H2C8 321 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 CHST11Q9NPF2 352 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 ZNF346Q9UL40 294 aaKnown RBP24.87■■□□□ 1.57
CCM2-218ENST00000541586 HDGFL3Q9Y3E1 203 aa24.87■■□□□ 1.57
CCM2-218ENST00000541586 H3BSA7 217 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 M0R3G1 203 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 ZNHIT1O43257 154 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 SEC14L2O76054 403 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 SLC2A5P22732 501 aa24.86■■□□□ 1.57
CCM2-218ENST00000541586 GP2P55259 537 aaKnown RBP24.86■■□□□ 1.57
CCM2-218ENST00000541586 HSF1Q00613 529 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms