RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ZNF835Q9Y2P0 537 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ADAM18Q9Y3Q7 739 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 ORC6Q9Y5N6 252 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 IER3IP1Q9Y5U9 82 aa8.32□□□□□ -1.08
DDX55-208ENST00000541259 DIDO1Q9BTC0 2240 aaKnown RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 A0A1W2PNV4 684 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 SLC22A20A6NK97 555 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 ZAR1LA6NP61 321 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 M0R129 80 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 BHLHE40O14503 412 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 SLC19A2O60779 497 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 SLC2A10O95528 541 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 CLIC3O95833 236 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 SLC6A6P31641 620 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 NTF4P34130 210 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 RPL4P36578 427 aaKnown RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 GIPRP48546 466 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 ADARB1P78563 741 aaKnown RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 RASGEF1BQ0VAM2 473 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 DBPQ10586 325 aaPredicted RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 TOP3AQ13472 1001 aaPredicted RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 MELKQ14680 651 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 SLC17A1Q14916 467 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 ACKR1Q16570 336 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 ANKDD1AQ495B1 522 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 SOWAHCQ53LP3 525 aaPredicted RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 SLC35F1Q5T1Q4 408 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 C6orf52Q5T4I8 152 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 DPY19L2P2Q6ZN68 376 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 SEM1Q6ZVN7 128 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 SLC35D2Q76EJ3 337 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 PXKQ7Z7A4 578 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 CCDC71Q8IV32 467 aaPredicted RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 UEVLDQ8IX04 471 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 ZIC4Q8N9L1 334 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 C9orf106Q8NAJ2 232 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 ST6GALNAC3Q8NDV1 305 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 OR9K2Q8NGE7 335 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 TEX47Q8TBZ9 253 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 RNF128Q8TEB7 428 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 CYGBQ8WWM9 190 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 Q96M85 177 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 ERMAPQ96PL5 475 aaPredicted RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 ZNF385AQ96PM9 386 aaKnown RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 TSPAN32Q96QS1 320 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 KATNB1Q9BVA0 655 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 PRRG4Q9BZD6 226 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 VCXQ9H320 206 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 VCX3BQ9H321 246 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 FANCFQ9NPI8 374 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 NRIP3Q9NQ35 241 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 MED29Q9NX70 200 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 PAQR5Q9NXK6 330 aaPredicted RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 SH3BGRL2Q9UJC5 107 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 TINAGQ9UJW2 476 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 ZNF346Q9UL40 294 aaKnown RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 MCTS1Q9ULC4 181 aaKnown RBP8.31□□□□□ -1.08
DDX55-208ENST00000541259 RASD1Q9Y272 281 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 HIVEP3Q5T1R4 2406 aa8.31□□□□□ -1.08
DDX55-208ENST00000541259 NCOA6Q14686 2063 aaPredicted RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 CHD6Q8TD26 2715 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 LOC100130705A0A1B0GUX0 176 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 LOC102725191A0A1B0GVB3 256 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 A0A1W2PRG6 482 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 H0YJX3 145 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 PRRG2O14669 202 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 IMPA2O14732 288 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 TRAF3IP2O43734 574 aaPredicted RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 WDR1O75083 606 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 C1QL1O75973 258 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 TOXO94900 526 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 CD14P08571 375 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 IFNGR1P15260 489 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 ZNF43P17038 809 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 CDH2P19022 906 aaPredicted RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 ACVR2AP27037 513 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 POU3F1Q03052 451 aaPredicted RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 RUNX1T1Q06455 604 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 MRPL49Q13405 166 aaKnown RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 C1DQ13901 141 aaKnown RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 IGFBP7Q16270 282 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 PGGHGQ32M88 737 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 C1orf185Q5T7R7 199 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 EEF1A1P5Q5VTE0 462 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 SLX4IPQ5VYV7 408 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 NSUN5P2Q63ZY6 315 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 RPL13AP3Q6NVV1 102 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 NCCRP1Q6ZVX7 275 aaPredicted RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 CREB3L2Q70SY1 520 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 FAM122BQ7Z309 247 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 P4HA3Q7Z4N8 544 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 TUSC5Q8IXB3 177 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 ZNF843Q8N446 348 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 LNX2Q8N448 690 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 DHRSXQ8N5I4 330 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 OR52L1Q8NGH7 329 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 UBE2FQ969M7 185 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 RASD2Q96D21 266 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 RDH12Q96NR8 316 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms