RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 USF1P22415 310 aaPredicted RBP12.54□□□□□ -0.4
MSRB3-209ENST00000540804 SH3BGRP55822 239 aaPredicted RBP12.54□□□□□ -0.4
MSRB3-209ENST00000540804 PCBP3P57721 371 aaKnown RBP12.54□□□□□ -0.4
MSRB3-209ENST00000540804 SNRPD2P62316 118 aaKnown RBP12.54□□□□□ -0.4
MSRB3-209ENST00000540804 PIGFQ07326 219 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 SF3A3Q12874 501 aaKnown RBP eCLIP12.54□□□□□ -0.4
MSRB3-209ENST00000540804 PMS2P3Q13401 168 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 CHRFAM7AQ494W8 412 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 SVOPLQ8N434 492 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 PIK3C3Q8NEB9 887 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 OR6T1Q8NGN1 323 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 VANGL1Q8TAA9 524 aaPredicted RBP12.54□□□□□ -0.4
MSRB3-209ENST00000540804 CKAP2Q8WWK9 683 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 ANKRD27Q96NW4 1050 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 NPHS2Q9NP85 383 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 SELENONQ9NZV5 590 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 LEF1Q9UJU2 399 aaPredicted RBP12.54□□□□□ -0.4
MSRB3-209ENST00000540804 SLC13A4Q9UKG4 626 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 IGHV2OR16-5A0A0B4J2B6 119 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 IGHV4-61A0A0C4DH41 118 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 LOC102725191A0A1B0GVB3 256 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 TMEM129A0AVI4 362 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 B9A039 149 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 C11orf98E9PRG8 122 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 PLPP3O14495 311 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 SERPINB7O75635 380 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 LYPD3O95274 346 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 PATE4P0C8F1 98 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 AHCYP23526 432 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 NR4A2P43354 598 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 PDLIM4P50479 330 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
MSRB3-209ENST00000540804 CYP51A1Q16850 503 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 MSMPQ1L6U9 139 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 ENTPD8Q5MY95 495 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 C1QTNF12Q5T7M4 302 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 CYB5R2Q6BCY4 276 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 KRT80Q6KB66 452 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 C5orf46Q6UWT4 87 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 SPATA21Q7Z572 469 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 NET1Q7Z628 596 aaPredicted RBP12.53□□□□□ -0.4
MSRB3-209ENST00000540804 LRRC17Q8N6Y2 441 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 ADPRHL1Q8NDY3 354 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 PROX1Q92786 737 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 CGREF1Q99674 301 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 ARHGDIGQ99819 225 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 SOX7Q9BT81 388 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 ASPNQ9BXN1 380 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 PLK3Q9H4B4 646 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 B3GNT2Q9NY97 397 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 CORO2BQ9UQ03 480 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 ANGPT4Q9Y264 503 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 NDUFAF1Q9Y375 327 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 ALPK2Q86TB3 2170 aa12.53□□□□□ -0.4
MSRB3-209ENST00000540804 ZNF99A8MXY4 864 aaPredicted RBP12.52□□□□□ -0.41
MSRB3-209ENST00000540804 hCG_2039718K7EN88 272 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 KPNA4O00629 521 aaPredicted RBP12.52□□□□□ -0.41
MSRB3-209ENST00000540804 CD79AP11912 226 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 HOXB1P14653 301 aaPredicted RBP12.52□□□□□ -0.41
MSRB3-209ENST00000540804 B4GALT1P15291 398 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 SRSF2Q01130 221 aaKnown RBP12.52□□□□□ -0.41
MSRB3-209ENST00000540804 PUDPQ08623 228 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 NFYCQ13952 458 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 EFNB3Q15768 340 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 C3orf36Q3SXR2 165 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 LINC00114Q6XXX2 140 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF813Q6ZN06 617 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 RANBP3LQ86VV4 465 aaPredicted RBP12.52□□□□□ -0.41
MSRB3-209ENST00000540804 CDK20Q8IZL9 346 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 C11orf65Q8NCR3 313 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 NUP37Q8NFH4 326 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 FGFBP3Q8TAT2 258 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 TAMM41Q96BW9 452 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 MAGEB18Q96M61 343 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF75AQ96N20 296 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF317Q96PQ6 595 aaPredicted RBP12.52□□□□□ -0.41
MSRB3-209ENST00000540804 EPYCQ99645 322 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 DOK1Q99704 481 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 CHODLQ9H9P2 273 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 MRPL39Q9NYK5 338 aaKnown RBP12.52□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF224Q9NZL3 707 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 USP22Q9UPT9 525 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 FKBP7Q9Y680 259 aa12.52□□□□□ -0.41
MSRB3-209ENST00000540804 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
MSRB3-209ENST00000540804 CHD3Q12873 2000 aaKnown RBP12.51□□□□□ -0.41
MSRB3-209ENST00000540804 LRP5LA4QPB2 252 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 RNF212BA8MTL3 300 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 LYNX1G3V0Z9 82 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 FBP2O00757 339 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 ANGPT2O15123 496 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 AKAP8O43823 692 aaKnown RBP12.51□□□□□ -0.41
MSRB3-209ENST00000540804 EDF1O60869 148 aaKnown RBP12.51□□□□□ -0.41
MSRB3-209ENST00000540804 CH25HO95992 272 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 CSF3P09919 207 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 ADORA3P0DMS8 318 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 LYNX1P0DP58 116 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 IFNGR1P15260 489 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 TNFRSF1BP20333 461 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 NPR2P20594 1047 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms