RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 ASB10Q8WXI3 467 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 TFAP2CQ92754 450 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 SLC25A36Q96CQ1 311 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 ZHX1-C8orf76Q96EF9 292 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 DNAJA3Q96EY1 480 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 SAMD8Q96LT4 415 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 OXGR1Q96P68 337 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 TSPAN32Q96QS1 320 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 ADI1Q9BV57 179 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 KATNB1Q9BVA0 655 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 MRPL13Q9BYD1 178 aaKnown RBP9.38□□□□□ -0.91
VPS33A-204ENST00000540669 NMNAT2Q9BZQ4 307 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 TP63Q9H3D4 680 aaPredicted RBP9.38□□□□□ -0.91
VPS33A-204ENST00000540669 TXNIPQ9H3M7 391 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF556Q9HAH1 456 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 TIGARQ9NQ88 270 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 FOXD3Q9UJU5 478 aaPredicted RBP9.38□□□□□ -0.91
VPS33A-204ENST00000540669 BAIAP2Q9UQB8 552 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 CAMK2AQ9UQM7 478 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 ADAM18Q9Y3Q7 739 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 LRRK2Q5S007 2527 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 IGHV3-15A0A0B4J1V0 119 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 SLC22A20A6NK97 555 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 IDH3BO43837 385 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 ADORA3P0DMS8 318 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 CDH2P19022 906 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-204ENST00000540669 ACVR2AP27037 513 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 AGTR1P30556 359 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 SDHAP31040 664 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 TIMP3P35625 211 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 GGT2P36268 569 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 CA7P43166 264 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 NUP107P57740 925 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 PMS2P3Q13401 168 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 RNPS1Q15287 305 aaKnown RBP9.37□□□□□ -0.91
VPS33A-204ENST00000540669 ACKR1Q16570 336 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 TMEM201Q5SNT2 666 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 C1orf185Q5T7R7 199 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 FAM205BPQ63HN1 556 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 GPR139Q6DWJ6 353 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 ACSM5Q6NUN0 579 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 SLC27A4Q6P1M0 643 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 GFRALQ6UXV0 394 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 GALNT5Q7Z7M9 940 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 RPRMLQ8N4K4 120 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 C9orf106Q8NAJ2 232 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 OR2T33Q8NG76 320 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 ZFP3Q96NJ6 502 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF385AQ96PM9 386 aaKnown RBP9.37□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF184Q99676 751 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-204ENST00000540669 TACO1Q9BSH4 297 aaKnown RBP9.37□□□□□ -0.91
VPS33A-204ENST00000540669 NAA11Q9BSU3 229 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-204ENST00000540669 ANKRD60Q9BZ19 345 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 VCX3BQ9H321 246 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 EXO5Q9H790 373 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 CMC2Q9NRP2 79 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 INIPQ9NRY2 104 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 TBC1D23Q9NUY8 699 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 FAM118AQ9NWS6 357 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 KLHL9Q9P2J3 617 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 MCTS1Q9ULC4 181 aaKnown RBP9.37□□□□□ -0.91
VPS33A-204ENST00000540669 HELZ2Q9BYK8 2649 aaKnown RBP9.37□□□□□ -0.91
VPS33A-204ENST00000540669 ESPL1Q14674 2120 aa9.37□□□□□ -0.91
VPS33A-204ENST00000540669 PCNX1Q96RV3 2341 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 SURF4O15260 269 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 TNFSF13O75888 250 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 AGFG2O95081 481 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 PPP1R3DO95685 299 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 CRHP06850 196 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 PGA4P0DJD7 388 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 PGA3P0DJD8 388 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 EDNRAP25101 427 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 GTF2E2P29084 291 aaKnown RBP9.36□□□□□ -0.91
VPS33A-204ENST00000540669 HSPA13P48723 471 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 RPL27P61353 136 aaKnown RBP9.36□□□□□ -0.91
VPS33A-204ENST00000540669 POU3F1Q03052 451 aaPredicted RBP9.36□□□□□ -0.91
VPS33A-204ENST00000540669 SRYQ05066 204 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 FOXD4Q12950 439 aaPredicted RBP9.36□□□□□ -0.91
VPS33A-204ENST00000540669 IL18R1Q13478 541 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 EIF2S3LQ2VIR3 472 aaKnown RBP9.36□□□□□ -0.91
VPS33A-204ENST00000540669 SLC25A30Q5SVS4 291 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF691Q5VV52 312 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 PLXDC2Q6UX71 529 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 RPTNQ6XPR3 784 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 PTCHD4Q6ZW05 846 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 ADCK1Q86TW2 530 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 IQCF1Q8N6M8 205 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 C10orf53Q8N6V4 93 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 ARIH2OSQ8N7S6 290 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 NAXEQ8NCW5 288 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 OR52L1Q8NGH7 329 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 OR5M9Q8NGP3 310 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 OR6X1Q8NH79 312 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 TEX47Q8TBZ9 253 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 ROBO4Q8WZ75 1007 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 RELTQ969Z4 430 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 GMPPAQ96IJ6 420 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms