RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 A0A1W2PPZ6 126 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 ZNF503-AS2A6NEH8 195 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 ZNF99A8MXY4 864 aaPredicted RBP11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 B9A039 149 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 M0QX08 132 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 PLPP3O14495 311 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 CHP2O43745 196 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 GPRIN2O60269 458 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 MT-ATP6P00846 226 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 THY1P04216 161 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 TP53P04637 393 aaPredicted RBP11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 HLA-DOBP13765 273 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 AQP1P29972 269 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 CALCRP30988 508 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 ARR3P36575 388 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 SERPINF1P36955 418 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 NCALDP61601 193 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 HGFACQ04756 655 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 ZP4Q12836 540 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 C1DQ13901 141 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 NPTX1Q15818 432 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 ADIPOQQ15848 244 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 CEACAM16Q2WEN9 425 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 TMEM249Q2WGJ8 235 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 UEVLDQ8IX04 471 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 GPR137CQ8N3F9 429 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 ZNF525Q8N782 197 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 IL17RDQ8NFM7 739 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 OR6T1Q8NGN1 323 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 NANOS1Q8WY41 292 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 ZNF75AQ96N20 296 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 MDFIQ99750 246 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 PLK3Q9H4B4 646 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 ZNF442Q9H7R0 627 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 SELENONQ9NZV5 590 aa11.38□□□□□ -0.59
SEMA4D-223ENST00000540475 SLC35F4A4IF30 521 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 NDUFS8O00217 210 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 ANGPT2O15123 496 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 CD247P20963 164 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 CRYBA2P53672 197 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 MTPNP58546 118 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 PUDPQ08623 228 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 PATL1Q86TB9 770 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 MYPOPQ86VE0 399 aaPredicted RBP11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 TSPYL5Q86VY4 417 aaPredicted RBP11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 WDFY1Q8IWB7 410 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 SMYD1Q8NB12 490 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 OR4D11Q8NGI4 311 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 FAM168AQ92567 244 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 FBXO17Q96EF6 278 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 DOK1Q99704 481 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 MCHR1Q99705 422 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 ASPNQ9BXN1 380 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 SEC61A2Q9H9S3 476 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 SLC13A4Q9UKG4 626 aa11.37□□□□□ -0.59
SEMA4D-223ENST00000540475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 TMEM129A0AVI4 362 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 LRRN3E7EW58 273 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 M0R3H8 397 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 FBP2O00757 339 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 NPPAP01160 153 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 CELA3BP08861 270 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 OR4A8P0C604 315 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 NQO1P15559 274 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 CBLP22681 906 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 PCGF2P35227 344 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 PPOXP50336 477 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 SNRPD2P62316 118 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 TUBA1BP68363 451 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 TUBA4AP68366 448 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 PMS2P3Q13401 168 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 CYP51A1Q16850 503 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 COQ5Q5HYK3 327 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 ENTPD8Q5MY95 495 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 C6orf52Q5T4I8 152 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 WDR88Q6ZMY6 472 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 TUBA1AQ71U36 451 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 CALHM3Q86XJ0 350 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 OR5J2Q8NH18 312 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 ADAMTS16Q8TE57 1224 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 HTRA1Q92743 480 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 TAMM41Q96BW9 452 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 TXNDC15Q96J42 360 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 SORCS2Q96PQ0 1159 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 KCNS3Q9BQ31 491 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 SLC19A3Q9BZV2 496 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 DENND2DQ9H6A0 471 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 NPHS2Q9NP85 383 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 MYOZ1Q9NP98 299 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 MRGBPQ9NV56 204 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 TAS2R5Q9NYW4 299 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 USP22Q9UPT9 525 aa11.36□□□□□ -0.59
SEMA4D-223ENST00000540475 IGHV2OR16-5A0A0B4J2B6 119 aa11.35□□□□□ -0.59
SEMA4D-223ENST00000540475 A8MV72 311 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-223ENST00000540475 M0R3G1 203 aa11.35□□□□□ -0.59
SEMA4D-223ENST00000540475 SASH3O75995 380 aa11.35□□□□□ -0.59
SEMA4D-223ENST00000540475 IGF2P01344 180 aa11.35□□□□□ -0.59
SEMA4D-223ENST00000540475 IGFBP1P08833 259 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-223ENST00000540475 POU3F1Q03052 451 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms