RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 NDE1Q9NXR1 346 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 MED31Q9Y3C7 131 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 ENPP4Q9Y6X5 453 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 V9GYQ6 96 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 OR6C65A6NJZ3 312 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 RPL36A-HNRNPH2H7BZ11 118 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 IGF2P01344 180 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 IFNGR1P15260 489 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 DNASE1P24855 282 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 ZNF83P51522 516 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 VLDLRP98155 873 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 TGFBR3Q03167 851 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 ACKR1Q16570 336 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 IQCCQ4KMZ1 466 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 TBPL2Q6SJ96 375 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 ABHD12BQ7Z5M8 362 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 C20orf196Q8IYI0 205 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 C17orf78Q8N4C9 275 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 OR1K1Q8NGR3 316 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 BCAS4Q8TDM0 211 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 LIPHQ8WWY8 451 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 BCL2L2Q92843 193 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 NEUROG1Q92886 237 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 BOD1Q96IK1 185 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 NELFAQ9H3P2 528 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 ESRP2Q9H6T0 727 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 GPR35Q9HC97 309 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 NGBQ9NPG2 151 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 NDUFAF4Q9P032 175 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 MAGEL2Q9UJ55 1249 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 SAMD4AQ9UPU9 718 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 CELSR1Q9NYQ6 3014 aa16.03■□□□□ 0.16
SNRPA1-203ENST00000540017 BLOC1S5-TXNDC5H3BN57 136 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 hCG_2039718K7EN88 272 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 M0R3G1 203 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 RNF13O43567 381 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 OR6A2O95222 327 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 SEMG1P04279 462 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 HIST1H2ABP04908 130 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 TSPAN19P0C672 248 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 MAKP20794 623 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 CALB2P22676 271 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 ART1P52961 327 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 BIDP55957 195 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 RPL18Q07020 188 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 CAMK2DQ13557 499 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 KEAP1Q14145 624 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 MELKQ14680 651 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 TRAM2Q15035 370 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 TBRG1Q3YBR2 411 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 HMBOX1Q6NT76 420 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 SLC35D2Q76EJ3 337 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 HIST3H2AQ7L7L0 130 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 NANOGNBQ7Z5D8 188 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 GPR137CQ8N3F9 429 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 PIK3C3Q8NEB9 887 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 ANKK1Q8NFD2 765 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 MOSPD2Q8NHP6 518 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 HIST1H2ACQ93077 130 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 NMNAT1Q9HAN9 279 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 CRLF2Q9HC73 371 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 RNF115Q9Y4L5 304 aa16.02■□□□□ 0.16
SNRPA1-203ENST00000540017 ROS1P08922 2347 aa16.02■□□□□ 0.15
SNRPA1-203ENST00000540017 A0A087WUU8 490 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 A0A096LPE4 126 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 A0A1W2PPZ6 126 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 CLOCKO15516 846 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 AKAP8O43823 692 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 GMNNO75496 209 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 DIRAS1O95057 198 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 F13BP05160 661 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 CD3EP07766 207 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 IFI30P13284 250 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 IFNA8P32881 189 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 AQP2P41181 271 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 ARF1P84077 181 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 LAPTM4AQ15012 233 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 CEACAM16Q2WEN9 425 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 LURAP1LQ8IV03 231 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 NRMQ8IXM6 262 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 KBTBD8Q8NFY9 601 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 AKAP1Q92667 903 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 MBD6Q96DN6 1003 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 BPIFA2Q96DR5 249 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 PYURFQ96I23 114 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 LRR1Q96L50 414 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 NSMCE2Q96MF7 247 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 AMDHD2Q9Y303 409 aa16.01■□□□□ 0.15
SNRPA1-203ENST00000540017 CADP27708 2225 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 ZNF726A6NNF4 738 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 SHISA9B4DS77 424 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 HS3ST1O14792 307 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 SEC14L2O76054 403 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 PRKCDQ05655 676 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 SPOCK1Q08629 439 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 FHL1Q13642 323 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 SPATS1Q496A3 300 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 ADAM5Q6NVV9 412 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 SSX8Q7RTT4 187 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 TRPM8Q7Z2W7 1104 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms