RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 KCNN3Q9UGI6 736 aa15.25■□□□□ 0.03
COPS3-212ENST00000539941 EXOSC1Q9Y3B2 195 aaKnown RBP15.25■□□□□ 0.03
COPS3-212ENST00000539941 AKAP13Q12802 2813 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 FAM183AA6NL82 134 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 ADRA2AP08913 450 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 LIPCP11150 499 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 HIST1H1CP16403 213 aaKnown RBP15.24■□□□□ 0.03
COPS3-212ENST00000539941 MYL12AP19105 171 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 DDOSTP39656 456 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.24■□□□□ 0.03
COPS3-212ENST00000539941 RIPPLY1Q0D2K3 151 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 TIGD6Q17RP2 521 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.24■□□□□ 0.03
COPS3-212ENST00000539941 ZFP69Q49AA0 526 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 C1QL3Q5VWW1 255 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 B3GNTL1Q67FW5 361 aaPredicted RBP15.24■□□□□ 0.03
COPS3-212ENST00000539941 GPR139Q6DWJ6 353 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 MARCH9Q86YJ5 346 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 FAM98AQ8NCA5 519 aaKnown RBP15.24■□□□□ 0.03
COPS3-212ENST00000539941 BBS1Q8NFJ9 593 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 OR52E2Q8NGJ4 325 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 MFSD8Q8NHS3 518 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 POC1BQ8TC44 478 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 PTP4A1Q93096 173 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 YIPF6Q96EC8 236 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 SCNM1Q9BWG6 230 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 JAM3Q9BX67 310 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 ASPNQ9BXN1 380 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 PROK2Q9HC23 129 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 MRPL39Q9NYK5 338 aaKnown RBP15.24■□□□□ 0.03
COPS3-212ENST00000539941 ABI3Q9P2A4 366 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 FBXL2Q9UKC9 423 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 RABL2BQ9UNT1 228 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 ADAM18Q9Y3Q7 739 aa15.24■□□□□ 0.03
COPS3-212ENST00000539941 MAP1BP46821 2468 aaKnown RBP15.23■□□□□ 0.03
COPS3-212ENST00000539941 CPAMD8Q8IZJ3 1885 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 FTCDNL1E5RQL4 147 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 FZD7O75084 574 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 P04436 131 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 SLC2A5P22732 501 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 CYB561P49447 251 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 CTXN1P60606 82 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 GXYLT1Q4G148 440 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 ZNF468Q5VIY5 522 aaPredicted RBP15.23■□□□□ 0.03
COPS3-212ENST00000539941 C3orf33Q6P1S2 294 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 FAM122BQ7Z309 247 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 ZBTB46Q86UZ6 589 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 NANOGP1Q8N7R0 232 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 PSD4Q8NDX1 1056 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 SLC25A43Q8WUT9 341 aaPredicted RBP15.23■□□□□ 0.03
COPS3-212ENST00000539941 OTULINQ96BN8 352 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 OR11A1Q9GZK7 315 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 HAO2Q9NYQ3 351 aa15.23■□□□□ 0.03
COPS3-212ENST00000539941 LSM2Q9Y333 95 aaKnown RBP15.23■□□□□ 0.03
COPS3-212ENST00000539941 MYL12BO14950 172 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 IGHA1P01876 353 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 LIFP15018 202 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 GRPRP30550 384 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 SDHAP31040 664 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 UGT2B10P36537 528 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 CLK1P49759 484 aaKnown RBP15.22■□□□□ 0.03
COPS3-212ENST00000539941 DSCR4P56555 118 aaPredicted RBP15.22■□□□□ 0.03
COPS3-212ENST00000539941 ERVK-25P63136 954 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 C1DQ13901 141 aaKnown RBP15.22■□□□□ 0.03
COPS3-212ENST00000539941 INPP5JQ15735 1006 aaPredicted RBP15.22■□□□□ 0.03
COPS3-212ENST00000539941 ABHD17BQ5VST6 288 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 TIGD3Q6B0B8 471 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 P2RY8Q86VZ1 359 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 BEST3Q8N1M1 668 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 GTPBP8Q8N3Z3 284 aaPredicted RBP15.22■□□□□ 0.03
COPS3-212ENST00000539941 OR1J4Q8NGS1 313 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 OR4K13Q8NH42 304 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 SLC25A36Q96CQ1 311 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 GON7Q9BXV9 100 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 TAS2R16Q9NYV7 291 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 KMT2BQ9UMN6 2715 aaPredicted RBP15.22■□□□□ 0.03
COPS3-212ENST00000539941 PNMA8CA0A1B0GUJ8 204 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 TMEM129A0AVI4 362 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 CCDC182A6NF36 153 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 M0R082 166 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 TRIM3O75382 744 aaPredicted RBP15.22■□□□□ 0.03
COPS3-212ENST00000539941 CASRP41180 1078 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 LGALS3BPQ08380 585 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 POU4F2Q12837 409 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 LCN1P1Q5VSP4 162 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 SLC6A19Q695T7 634 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 XKRXQ6PP77 449 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 ELMOD2Q8IZ81 293 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 CLEC1AQ8NC01 280 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 NPEPL1Q8NDH3 523 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 DDOQ99489 341 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 TEAD3Q99594 435 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 NPAS1Q99742 590 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 HCAR1Q9BXC0 346 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 MED20Q9H944 212 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 KLHL1Q9NR64 748 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 TAS2R5Q9NYW4 299 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 TNFRSF10DQ9UBN6 386 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 DOCK10Q96BY6 2186 aa15.22■□□□□ 0.03
COPS3-212ENST00000539941 EML6Q6ZMW3 1958 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms