RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SF3B5Q9BWJ5 86 aaKnown RBP13.76□□□□□ -0.21
DDB1-216ENST00000539739 UCK2Q9BZX2 261 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 RNF122Q9H9V4 155 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 MOV10Q9HCE1 1003 aaKnown RBP13.76□□□□□ -0.21
DDB1-216ENST00000539739 KLHL13Q9P2N7 655 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 SEC14L4Q9UDX3 406 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 HIF3AQ9Y2N7 669 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 ESPL1Q14674 2120 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 A0A1B0GUH1 482 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 KDM4EB2RXH2 506 aaPredicted RBP13.75□□□□□ -0.21
DDB1-216ENST00000539739 ZNF814B7Z6K7 855 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 C11orf98E9PRG8 122 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 MS4A18H0YCH9 400 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 RCBTB2O95199 551 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 CLPTM1O96005 669 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 OCM2P0CE71 109 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 OCMP0CE72 109 aaPredicted RBP13.75□□□□□ -0.21
DDB1-216ENST00000539739 ZNF43P17038 809 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 KLK2P20151 261 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 P2RY4P51582 365 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 PMPCAQ10713 525 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 ZP4Q12836 540 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
DDB1-216ENST00000539739 MS4A18Q3C1V0 323 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 CD300LDQ6UXZ3 194 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 SATL1Q86VE3 508 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 C9orf106Q8NAJ2 232 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 ABHD3Q8WU67 409 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 CHPT1Q8WUD6 406 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 ZFP3Q96NJ6 502 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 TNFRSF13CQ96RJ3 184 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 NIPSNAP1Q9BPW8 284 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 RBM4BQ9BQ04 359 aaKnown RBP13.75□□□□□ -0.21
DDB1-216ENST00000539739 RBM4Q9BWF3 364 aaKnown RBP13.75□□□□□ -0.21
DDB1-216ENST00000539739 GABARAPL1Q9H0R8 117 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 ZNF696Q9H7X3 374 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 GP6Q9HCN6 339 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 TAS2R5Q9NYW4 299 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 EMC3Q9P0I2 261 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 SIGLEC7Q9Y286 467 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 MEMO1Q9Y316 297 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 LOC105371267A0A1B0GV96 52 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 LOC102725191A0A1B0GVB3 256 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 A0A1W2PNV4 684 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 ANKRD34BA5PLL1 514 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 NOTOA8MTQ0 251 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 CCL21O00585 134 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 GPR171O14626 319 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 RAMP1O60894 148 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 PTP4A3O75365 173 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 NDUFB2O95178 105 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 GLI4P10075 376 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 UQCRC1P31930 480 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 AQP2P41181 271 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 NR1H2P55055 460 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 RPS4XP62701 263 aaKnown RBP13.75□□□□□ -0.21
DDB1-216ENST00000539739 RPL18Q07020 188 aaKnown RBP13.75□□□□□ -0.21
DDB1-216ENST00000539739 SLC17A1Q14916 467 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 TRIP10Q15642 601 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 RPL13AP3Q6NVV1 102 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 FAHD1Q6P587 224 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 ZBTB49Q6ZSB9 765 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 RASSF6Q6ZTQ3 369 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 PXKQ7Z7A4 578 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 UEVLDQ8IX04 471 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 KDM8Q8N371 416 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 RPRMLQ8N4K4 120 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 MARVELD2Q8N4S9 558 aa13.75□□□□□ -0.21
DDB1-216ENST00000539739 GMPPAQ96IJ6 420 aaPredicted RBP13.75□□□□□ -0.21
DDB1-216ENST00000539739 RGS13O14921 159 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 MAGEB3O15480 346 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 TSPAN19P0C672 248 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 UQCRFS1P47985 274 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 EIF2B2P49770 351 aaKnown RBP13.74□□□□□ -0.21
DDB1-216ENST00000539739 DAPP51397 102 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 SLC16A1P53985 500 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 POU4F3Q15319 338 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 ZNF829Q3KNS6 432 aaPredicted RBP13.74□□□□□ -0.21
DDB1-216ENST00000539739 ALG10Q5BKT4 473 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 TMEM201Q5SNT2 666 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 RIPPLY2Q5TAB7 128 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 SMARCD3Q6STE5 483 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 SEM1Q6ZVN7 128 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 EPHX4Q8IUS5 362 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 OR9K2Q8NGE7 335 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 SUN5Q8TC36 379 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 FANK1Q8TC84 345 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 INTS12Q96CB8 462 aaKnown RBP13.74□□□□□ -0.21
DDB1-216ENST00000539739 SMURF2Q9HAU4 748 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 MCCC2Q9HCC0 563 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 FANCFQ9NPI8 374 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 KRT84Q9NSB2 600 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 POFUT2Q9Y2G5 429 aa13.74□□□□□ -0.21
DDB1-216ENST00000539739 ZNF462Q96JM2 2506 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 IGKV3D-15A0A087WSY6 115 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 A0A1W2PRG6 482 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 ZNF716A6NP11 495 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 ZNF724A8MTY0 619 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 SERPINI2O75830 405 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 CRHP06850 196 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms