RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SLC26A7Q8TE54 656 aa16.59■□□□□ 0.25
TNFRSF1A-212ENST00000539372 ZNF317Q96PQ6 595 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-212ENST00000539372 KATNB1Q9BVA0 655 aa16.59■□□□□ 0.25
TNFRSF1A-212ENST00000539372 NANOGQ9H9S0 305 aa16.59■□□□□ 0.25
TNFRSF1A-212ENST00000539372 FGFR1OP2Q9NVK5 253 aa16.59■□□□□ 0.25
TNFRSF1A-212ENST00000539372 MRPL39Q9NYK5 338 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-212ENST00000539372 CRNNQ9UBG3 495 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-212ENST00000539372 ZNF503-AS2A6NEH8 195 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 PLPP3O14495 311 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CHP2O43745 196 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 LY6HO94772 140 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 IGLV1-44P01699 117 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 THY1P04216 161 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 TROVE2P10155 538 aaKnown RBP eCLIP16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 BMP4P12644 408 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CALCRP30988 508 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CAPZA2P47755 286 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CYLC2Q14093 348 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 VMACQ2NL98 169 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 RABL3Q5HYI8 236 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 LINC00114Q6XXX2 140 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MYPOPQ86VE0 399 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 TSPYL5Q86VY4 417 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 C20orf196Q8IYI0 205 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 OR10H5Q8NGA6 315 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ADAMTS16Q8TE57 1224 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SLC7A7Q9UM01 511 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 NOX1Q9Y5S8 564 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 PMF1-BGLAPU3KQ54 211 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CR1P17927 2039 aa16.58■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SLC35F4A4IF30 521 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ZNF99A8MXY4 864 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 C11orf98E9PRG8 122 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 KPNA4O00629 521 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 LYPD3O95274 346 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CH25HO95992 272 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 TP53P04637 393 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 HOXB1P14653 301 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 PAX7P23759 505 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 IDH3GP51553 393 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ARFIP2P53365 341 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CRYBA2P53672 197 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 NPRL3Q12980 569 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CAMK2DQ13557 499 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SWI5Q1ZZU3 235 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MMEL1Q495T6 779 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 INTS11Q5TA45 600 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 REP15Q6BDI9 236 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CGB2Q6NT52 195 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 NHLRC1Q6VVB1 395 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 OR5J2Q8NH18 312 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 LRRC58Q96CX6 371 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CA10Q9NS85 328 aa16.57■□□□□ 0.24
TNFRSF1A-212ENST00000539372 TRAPPC13A5PLN9 417 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ZNF726A6NNF4 738 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 FXYD1O00168 92 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 GPRIN2O60269 458 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MT-ATP6P00846 226 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 IGKV3-15P01624 115 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 VIMP08670 466 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ADORA3P0DMS8 318 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CBR1P16152 277 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SERPINF1P36955 418 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 EFNA4P52798 201 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 DSCR9P59020 149 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 KLF10Q13118 480 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 C3orf36Q3SXR2 165 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 TTC33Q6PID6 262 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MDP1Q86V88 176 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 FAM169BQ8N8A8 192 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ECSITQ9BQ95 431 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SAR1AQ9NR31 198 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ZNF446Q9NWS9 450 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 USP22Q9UPT9 525 aa16.56■□□□□ 0.24
TNFRSF1A-212ENST00000539372 A0A096LNT2 108 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 KIAA1324LA8MWY0 1029 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MRASO14807 208 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 OR6A2O95222 327 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 OR4A8P0C604 315 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 IFNGR1P15260 489 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 TNFRSF1BP20333 461 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SNRPD2P62316 118 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ADIPOQQ15848 244 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ZNF74Q16587 644 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CCDC80Q76M96 950 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 PXKQ7Z7A4 578 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SNX32Q86XE0 403 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CALHM3Q86XJ0 350 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 LRRC17Q8N6Y2 441 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 OR8J3Q8NGG0 315 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 OR6N1Q8NGY5 312 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 FAM168AQ92567 244 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SH3GL1Q99961 368 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ULBP2Q9BZM5 246 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MOV10Q9HCE1 1003 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 B3GAT2Q9NPZ5 323 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 YAE1D1Q9NRH1 226 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ABCA2Q9BZC7 2435 aa16.55■□□□□ 0.24
TNFRSF1A-212ENST00000539372 LOC100653049A0A140TA62 436 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CD5LO43866 347 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms