RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 MMP25Q9NPA2 562 aa8.03□□□□□ -1.12
DDB1-213ENST00000539332 PLSCR3Q9NRY6 295 aa8.03□□□□□ -1.12
DDB1-213ENST00000539332 MRPS18AQ9NVS2 196 aaKnown RBP8.03□□□□□ -1.12
DDB1-213ENST00000539332 MYOTQ9UBF9 498 aa8.03□□□□□ -1.12
DDB1-213ENST00000539332 RPS6KB2Q9UBS0 482 aa8.03□□□□□ -1.12
DDB1-213ENST00000539332 NUFIP1Q9UHK0 495 aaKnown RBP8.03□□□□□ -1.12
DDB1-213ENST00000539332 TEKT2Q9UIF3 430 aa8.03□□□□□ -1.12
DDB1-213ENST00000539332 KIAA1549Q9HCM3 1950 aa8.03□□□□□ -1.12
DDB1-213ENST00000539332 IGLV3-32A0A0A0MS00 114 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 LINC00862A6NCI5 91 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 KDM4EB2RXH2 506 aaPredicted RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 GTPBP1O00178 669 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 MASP2O00187 686 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 BHLHE40O14503 412 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 SMAD7O15105 426 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 ORC5O43913 435 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 PRKYO43930 277 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 ENTPD6O75354 484 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 RCBTB2O95199 551 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 CNOT4O95628 575 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 HPP00738 406 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 HLA-DQB1P01920 261 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 PRKAR1AP10644 381 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 SLC1A3P43003 542 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 SUMO3P55854 103 aaPredicted RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 RPS4XP62701 263 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 MRPL28Q13084 256 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 GALEQ14376 348 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 ZNF79Q15937 498 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 SYT14P1Q58G82 188 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 BICRALQ6AI39 1079 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 TMEM81Q6P7N7 255 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 FAM131AQ6UXB0 335 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 CDK20Q8IZL9 346 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 LNX2Q8N448 690 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 TCEANCQ8N8B7 351 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 DUSP18Q8NEJ0 188 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 TMEM163Q8TC26 289 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 FANK1Q8TC84 345 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 NTNG2Q96CW9 530 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 FAM122AQ96E09 287 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 IP6K3Q96PC2 410 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 IL4I1Q96RQ9 567 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 AIFM2Q9BRQ8 373 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 TSSK6Q9BXA6 273 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 DEFB126Q9BYW3 111 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 PRRG3Q9BZD7 231 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 OR52D1Q9H346 318 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 NDUFB11Q9NX14 153 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 TVP23BQ9NYZ1 205 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 MAP1BP46821 2468 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 PTPRQQ9UMZ3 2332 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 A0A0G2JMP0 313 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 FABP12A6NFH5 140 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 A8MV72 311 aaPredicted RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 WWP2O00308 870 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 ETV2O00321 342 aaPredicted RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 TFECO14948 347 aaPredicted RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 SURF4O15260 269 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 SLC43A1O75387 559 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 GPX5O75715 221 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 HMGN1P05114 100 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 TSPAN19P0C672 248 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 ICAM2P13598 275 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 RPS19P39019 145 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 MAP2K3P46734 347 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 EIF1AXP47813 144 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 SLC9A3P48764 834 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 NUDT6P53370 316 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 PPP3R1P63098 170 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 CD83Q01151 205 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 ZNF91Q05481 1191 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 Q0VFX4 171 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 MLLT11Q13015 90 aaPredicted RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 CLN3Q13286 438 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 BAK1Q16611 211 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 NTRK2Q16620 822 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 TRIQKQ629K1 86 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 SLC30A6Q6NXT4 461 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 THSD4Q6ZMP0 1018 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 LHFPL2Q6ZUX7 228 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 MARCH3Q86UD3 253 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 YIPF7Q8N8F6 280 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 NAXEQ8NCW5 288 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 C19orf18Q8NEA5 215 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 OR2T33Q8NG76 320 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 OR8H1Q8NGG4 311 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 OR13C2Q8NGS9 318 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 OR5W2Q8NH69 310 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 UBASH3BQ8TF42 649 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 SLC25A46Q96AG3 418 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 SAMD8Q96LT4 415 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 OPALINQ96PE5 141 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 FYTTD1Q96QD9 318 aaKnown RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 TBL1XR1Q9BZK7 514 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 C11orf54Q9H0W9 315 aaPredicted RBP8.02□□□□□ -1.13
DDB1-213ENST00000539332 UBQLN3Q9H347 655 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 RNF167Q9H6Y7 350 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 MCCC2Q9HCC0 563 aa8.02□□□□□ -1.13
DDB1-213ENST00000539332 HHATLQ9HCP6 504 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms