RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 M0QX08 132 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 M0R3G1 203 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 PDE5AO76074 875 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 C8BP07358 591 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 HLA-DOBP13765 273 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 CALCRP30988 508 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 IDH3GP51553 393 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-206ENST00000539320 PMS2P3Q13401 168 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 NPTX1Q15818 432 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 DUSP7Q16829 419 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 MST1LQ2TV78 715 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 CARD17Q5XLA6 110 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 PATL1Q86TB9 770 aaKnown RBP19.3■□□□□ 0.68
SCARB1-206ENST00000539320 C20orf196Q8IYI0 205 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 OR4F15Q8NGB8 312 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 OR6T1Q8NGN1 323 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 YAE1D1Q9NRH1 226 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 MED29Q9NX70 200 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 ADAM21Q9UKJ8 722 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 NOX1Q9Y5S8 564 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 FKBP7Q9Y680 259 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 ATRQ13535 2644 aa19.3■□□□□ 0.68
SCARB1-206ENST00000539320 CPSF4LA6NMK7 179 aaKnown RBP19.29■□□□□ 0.68
SCARB1-206ENST00000539320 ZNF99A8MXY4 864 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-206ENST00000539320 SEC14L2O76054 403 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 MT-ATP6P00846 226 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 CELA3BP08861 270 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 CBR1P16152 277 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 CD247P20963 164 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 LOXL1Q08397 574 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-206ENST00000539320 TRMT5Q32P41 509 aaKnown RBP19.29■□□□□ 0.68
SCARB1-206ENST00000539320 PHYHD1Q5SRE7 291 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 INTS11Q5TA45 600 aaKnown RBP19.29■□□□□ 0.68
SCARB1-206ENST00000539320 METTL21CQ5VZV1 264 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 VHLLQ6RSH7 139 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 MYPOPQ86VE0 399 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-206ENST00000539320 CCDC36Q8IYA8 594 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 OR10A6Q8NH74 314 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 VANGL1Q8TAA9 524 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-206ENST00000539320 C10orf105Q8TEF2 133 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 TAMM41Q96BW9 452 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 EMC6Q9BV81 110 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 TMEM120AQ9BXJ8 343 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 B3GAT2Q9NPZ5 323 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 USP22Q9UPT9 525 aa19.29■□□□□ 0.68
SCARB1-206ENST00000539320 RTTNQ86VV8 2226 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 ZNF503-AS2A6NEH8 195 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 SASH3O75995 380 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 LY6HO94772 140 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 ARR3P36575 388 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 SERPINF1P36955 418 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 CAPZA2P47755 286 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 NPRL3Q12980 569 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 ADIPOQQ15848 244 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 TMEM249Q2WGJ8 235 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 ENTPD8Q5MY95 495 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 SLC46A3Q7Z3Q1 461 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 MDP1Q86V88 176 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 NUP37Q8NFH4 326 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 OR5J2Q8NH18 312 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 LRR1Q96L50 414 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 SORCS2Q96PQ0 1159 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 TNFRSF13CQ96RJ3 184 aa19.28■□□□□ 0.68
SCARB1-206ENST00000539320 SLC35F4A4IF30 521 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 B9A039 149 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 PLPP3O14495 311 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 GPRIN2O60269 458 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 SERPINI2O75830 405 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 F12P00748 615 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-206ENST00000539320 OR4A8P0C604 315 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 EFNB3Q15768 340 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 VMACQ2NL98 169 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 NHLRC1Q6VVB1 395 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 LINC00114Q6XXX2 140 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 WDR88Q6ZMY6 472 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 PXKQ7Z7A4 578 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 RBM45Q8IUH3 476 aaKnown RBP19.27■□□□□ 0.68
SCARB1-206ENST00000539320 OR4D11Q8NGI4 311 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 ADAMTS16Q8TE57 1224 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 NANOS1Q8WY41 292 aaKnown RBP19.27■□□□□ 0.68
SCARB1-206ENST00000539320 TXNDC15Q96J42 360 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 ULBP2Q9BZM5 246 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 ZNF442Q9H7R0 627 aa19.27■□□□□ 0.68
SCARB1-206ENST00000539320 IGHV2OR16-5A0A0B4J2B6 119 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 TRAPPC13A5PLN9 417 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 ZNF726A6NNF4 738 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 FBP2O00757 339 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 LYPD3O95274 346 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 AHCYP23526 432 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 PDLIM4P50479 330 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 VLDLRP98155 873 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 HGFACQ04756 655 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 CAMK2DQ13557 499 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 C6orf52Q5T4I8 152 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 OR6N1Q8NGY5 312 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 SLC26A7Q8TE54 656 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 PROX1Q92786 737 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 POFUT2Q9Y2G5 429 aa19.26■□□□□ 0.67
SCARB1-206ENST00000539320 A8MV72 311 aaPredicted RBP19.25■□□□□ 0.67
SCARB1-206ENST00000539320 C11orf98E9PRG8 122 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms