RNA–Protein interactions for RNA: ENST00000538910.1

LPCAT3-207, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-207ENST00000538910 RBM4Q9BWF3 364 aaKnown RBP17.13■□□□□ 0.33
LPCAT3-207ENST00000538910 ZNF275Q9NSD4 429 aaPredicted RBP17.13■□□□□ 0.33
LPCAT3-207ENST00000538910 SLC6A13Q9NSD5 602 aa17.13■□□□□ 0.33
LPCAT3-207ENST00000538910 IFT52Q9Y366 437 aa17.13■□□□□ 0.33
LPCAT3-207ENST00000538910 TRAV20A0A0B4J274 112 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 A0A0G2JPF8 293 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 HNRNPCL2B2RXH8 293 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 HNRNPCL3B7ZW38 293 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 M0R082 166 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 M0R3G1 203 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 RFXANKO14593 260 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 TRAF3IP2O43734 574 aaPredicted RBP17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 AKAP8O43823 692 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 HNRNPCL1O60812 293 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 HNRNPCL4P0DMR1 293 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 CD79AP11912 226 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 CRATP43155 626 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 PIGFQ07326 219 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 FXNQ16595 210 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 TRMT5Q32P41 509 aaKnown RBP17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 RPS26P11Q5JNZ5 115 aaPredicted RBP17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 FAM69AQ5T7M9 428 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 THSD4Q6ZMP0 1018 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 NET1Q7Z628 596 aaPredicted RBP17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 LRP11Q86VZ4 500 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 TEX29Q8N6K0 151 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 ZNF417Q8TAU3 575 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 LRR1Q96L50 414 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 ZNF587Q96SQ5 575 aaPredicted RBP17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 C12orf10Q9HB07 376 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 NOX1Q9Y5S8 564 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 GPR45Q9Y5Y3 372 aa17.12■□□□□ 0.33
LPCAT3-207ENST00000538910 MS4A18H0YCH9 400 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 PPIHO43447 177 aaKnown RBP17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 AVPP01185 164 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 EPHA1P21709 976 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 GRPRP30550 384 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 DSTNP60981 165 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 HOXC5Q00444 222 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 MYBPC1Q00872 1141 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 MS4A18Q3C1V0 323 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 C5orf46Q6UWT4 87 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 GLB1L3Q8NCI6 653 aaPredicted RBP17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 TMEM19Q96HH6 336 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 JMJD8Q96S16 334 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 ZNF416Q9BWM5 594 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 DENND2DQ9H6A0 471 aaPredicted RBP17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 TPT1P8Q9HAU6 139 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 PNPOQ9NVS9 261 aa17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 MYEF2Q9P2K5 600 aaKnown RBP17.11■□□□□ 0.33
LPCAT3-207ENST00000538910 RP2O75695 350 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 PNPP00491 289 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 ZCCHC18P0CG32 403 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 ANPEPP15144 967 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 LIMS1P48059 325 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 RPS23P62266 143 aaKnown RBP17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 MAD2L1BPQ15013 274 aaPredicted RBP17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 ZNF311Q5JNZ3 666 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 GKAP1Q5VSY0 366 aaPredicted RBP17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 NHLRC1Q6VVB1 395 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 ZNF813Q6ZN06 617 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 ADPRHL1Q8NDY3 354 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 SLC38A4Q969I6 547 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 ZBTB18Q99592 522 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 ZNF385DQ9H6B1 395 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 CACYBPQ9HB71 228 aaKnown RBP17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 G6PC2Q9NQR9 355 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 THUMPD1Q9NXG2 353 aaKnown RBP17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 ZNF224Q9NZL3 707 aa17.1■□□□□ 0.33
LPCAT3-207ENST00000538910 SDHDO14521 159 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 NCR1O76036 304 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 HPRP00739 348 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 NAT2P11245 290 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 HLA-DOBP13765 273 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 GIPRP48546 466 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 AQP5P55064 265 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 RAB1AP62820 205 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 GALK2Q01415 458 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 MFSD13AQ14CX5 517 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 CARD17Q5XLA6 110 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 UEVLDQ8IX04 471 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 LSMEM1Q8N8F7 131 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 EMC6Q9BV81 110 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 BCL2L10Q9HD36 194 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 DUSP13Q9UII6 198 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 ZNF346Q9UL40 294 aaKnown RBP17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 FZR1Q9UM11 496 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 POFUT2Q9Y2G5 429 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 TRRAPQ9Y4A5 3859 aa17.09■□□□□ 0.33
LPCAT3-207ENST00000538910 IGKV1D-42A0A075B6H8 117 aa17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 TRAV36DV7A0A075B6V5 113 aa17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 LOC105371242A0A075B767 164 aa17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 TMEM247A6NEH6 219 aa17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 IL6P05231 212 aa17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 PTDSS1P48651 473 aaKnown RBP17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 ACSM5Q6NUN0 579 aa17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 SLC41A3Q96GZ6 507 aa17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 B3GAT2Q9NPZ5 323 aa17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 SLC52A3Q9NQ40 469 aa17.08■□□□□ 0.32
LPCAT3-207ENST00000538910 KLHL14Q9P2G3 628 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms