RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CASRP41180 1078 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 EIF1P41567 113 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 RBM34P42696 430 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 PPICP45877 212 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 STARP49675 285 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 VEGFBP49765 207 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 EPHB3P54753 998 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 SRSF3P84103 164 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 NAAAQ02083 359 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TNFRSF17Q02223 184 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 GUCA2AQ02747 115 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 LTBQ06643 244 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 PRDX1Q06830 199 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 NOGQ13253 232 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 FGL2Q14314 439 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 NR0B2Q15466 257 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TAF12Q16514 161 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 DUSP5Q16690 384 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 PCGF3Q3KNV8 242 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TMEM52BQ4KMG9 183 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 VWA2Q5GFL6 755 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 SLC6A19Q695T7 634 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 FAM109BQ6ICB4 259 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF425Q6IV72 752 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TMEM88Q6PEY1 159 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ENPP7Q6UWV6 458 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 MAMSTRQ6ZN01 415 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ACOT7LQ6ZUV0 252 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 FAM122BQ7Z309 247 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 C12orf40Q86WS4 652 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 NRROSQ86YC3 692 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TMEM25Q86YD3 366 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 GABRG1Q8N1C3 465 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 NPEPL1Q8NDH3 523 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 SLC30A7Q8NEW0 376 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 STEAP2Q8NFT2 490 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 OR52E2Q8NGJ4 325 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 OR51S1Q8NGJ8 323 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 OR2A1Q8NGT9 310 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 OR4C6Q8NH72 309 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 OR5K2Q8NHB8 316 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ELP5Q8TE02 316 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ADAMTS15Q8TE58 950 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 CCDC107Q8WV48 283 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ASB12Q8WXK4 309 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 HOXB13Q92826 284 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ARRDC3Q96B67 414 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 INTS12Q96CB8 462 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 IGSF21Q96ID5 467 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 VRK1Q99986 396 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ADAT1Q9BUB4 502 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 PTDSS2Q9BVG9 487 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TEX101Q9BY14 249 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 SEC11CQ9BY50 192 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TTTY10Q9BZA0 68 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TLNRD1Q9H1K6 362 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 OR51M1Q9H341 326 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TMEM27Q9HBJ8 222 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 SLC17A5Q9NRA2 495 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 CYTL1Q9NRR1 136 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 IL36AQ9UHA7 158 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 MAFFQ9ULX9 164 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ENTPD2Q9Y5L3 495 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 NUP210LQ5VU65 1888 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 MDC1Q14676 2089 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TRAV8-7A0A075B6U6 113 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 A0A0B4J2E0 115 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 A0A1B0GX12 115 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 GGT3PA6NGU5 568 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 OR5H14A6NHG9 310 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 OR4C45A6NMZ5 311 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 SCAMP1O15126 338 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 ARPC3O15145 178 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 RLN1P04808 185 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 NGFRP08138 427 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 GUSBP08236 651 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 IFI6P09912 130 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 GKN3PP0CG01 181 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 HIST1H1CP16403 213 aaKnown RBP6.31□□□□□ -1.4
CPSF7-215ENST00000536145 GABRR2P28476 465 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 NAA10P41227 235 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-215ENST00000536145 TSFMP43897 325 aaKnown RBP6.31□□□□□ -1.4
CPSF7-215ENST00000536145 HAAOP46952 286 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 SLC6A9P48067 706 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 FNTBP49356 437 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 EFNB2P52799 333 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 SLC25A1P53007 311 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 SLC16A1P53985 500 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 HGFACQ04756 655 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 PJVKQ0ZLH3 352 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 SREBF2Q12772 1141 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 ALKBH1Q13686 389 aaKnown RBP6.31□□□□□ -1.4
CPSF7-215ENST00000536145 COL19A1Q14993 1142 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 INPP5JQ15735 1006 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-215ENST00000536145 PNLIPRP3Q17RR3 467 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 SWI5Q1ZZU3 235 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 NDUFAF6Q330K2 333 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 PLEKHN1Q494U1 663 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-215ENST00000536145 Q499Y3 187 aa6.31□□□□□ -1.4
CPSF7-215ENST00000536145 MRPL2Q5T653 305 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms