RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TMEM43Q9BTV4 400 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 B3GAT2Q9NPZ5 323 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 ARFGEF3Q5TH69 2177 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 ZNF726A6NNF4 738 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 M0QX08 132 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 M0R3H8 397 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 TPST2O60704 377 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 FMO6PO60774 539 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 HPRP00739 348 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 IFNA2P01563 188 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 BGLAPP02818 100 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 HLA-DOBP13765 273 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 USF1P22415 310 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 AHCYP23526 432 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 CALCRP30988 508 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 ARR3P36575 388 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 IDH3GP51553 393 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 PCBP3P57721 371 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 MTPNP58546 118 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 VLDLRP98155 873 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 POU3F1Q03052 451 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 PUDPQ08623 228 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 NPRL3Q12980 569 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 NFYCQ13952 458 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 ADIPOQQ15848 244 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 CHRFAM7AQ494W8 412 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 C6orf52Q5T4I8 152 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 ZNF613Q6PF04 617 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 SNX32Q86XE0 403 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 PTOV1Q86YD1 416 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 SLC30A8Q8IWU4 369 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 C20orf196Q8IYI0 205 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 NUP37Q8NFH4 326 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 IL17RDQ8NFM7 739 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 TSPEARQ8WU66 669 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 NANOS1Q8WY41 292 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 ZNF837Q96EG3 531 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 LRR1Q96L50 414 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 MOGAT1Q96PD6 335 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 ARHGDIGQ99819 225 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 VRK1Q99986 396 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 WFDC6Q9BQY6 131 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 SIKE1Q9BRV8 207 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 EMC6Q9BV81 110 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 SEC61A2Q9H9S3 476 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 NPHS2Q9NP85 383 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 MRPL39Q9NYK5 338 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 FBXO9Q9UK97 447 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 USP22Q9UPT9 525 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 NOX1Q9Y5S8 564 aa14.06□□□□□ -0.16
CLSTN3-204ENST00000535313 SLC35F4A4IF30 521 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 OR6A2O95222 327 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 MT-ATP6P00846 226 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 OPN1SWP03999 348 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 C8BP07358 591 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 CELA3BP08861 270 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 EFNB3Q15768 340 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 CARTPTQ16568 116 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 DUSP7Q16829 419 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 CYB5R2Q6BCY4 276 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 PXKQ7Z7A4 578 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 MDP1Q86V88 176 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 RETREG3Q86VR2 466 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 OR6N1Q8NGY5 312 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 SORCS2Q96PQ0 1159 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 PIMREGQ9BSJ6 248 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 PLK3Q9H4B4 646 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 ZNF385DQ9H6B1 395 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 MYOZ1Q9NP98 299 aaPredicted RBP14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 MED29Q9NX70 200 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 POFUT2Q9Y2G5 429 aa14.05□□□□□ -0.16
CLSTN3-204ENST00000535313 A0A0G2JND7 137 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 NDUFS8O00217 210 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 PLPP3O14495 311 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 DYNC1I1O14576 645 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 CHP2O43745 196 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 EDF1O60869 148 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 SERPINI2O75830 405 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 SEC14L2O76054 403 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 VIMP08670 466 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 CAMK2DQ13557 499 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 SELPLGQ14242 412 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 PHYHD1Q5SRE7 291 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 INTS11Q5TA45 600 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 METTL21CQ5VZV1 264 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 PODNL1Q6PEZ8 512 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 PATL1Q86TB9 770 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 ANKS4BQ8N8V4 417 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 OR6T1Q8NGN1 323 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 OR5J2Q8NH18 312 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 SLC26A7Q8TE54 656 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 TXNDC15Q96J42 360 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 KCNK17Q96T54 332 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 ULBP2Q9BZM5 246 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 RAB1BQ9H0U4 201 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 ZNF442Q9H7R0 627 aa14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 KAT8Q9H7Z6 458 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-204ENST00000535313 IGHV2OR16-5A0A0B4J2B6 119 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 LOC390937A0A1W2PQ73 354 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 ZNF503-AS2A6NEH8 195 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms