RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CDK10Q15131 360 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 LBHQ53QV2 105 aaPredicted RBP2.85□□□□□ -1.95
USP48-215ENST00000534705 C10orf120Q5SQS8 335 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 TMEM215Q68D42 235 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 SPINK14Q6IE38 97 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 PAQR6Q6TCH4 344 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 CES3Q6UWW8 571 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 PLEKHG7Q6ZR37 379 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 CENPUQ71F23 418 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 PRUNE1Q86TP1 453 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 TAC4Q86UU9 113 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 SLC47A2Q86VL8 602 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 ANKRD46Q86W74 232 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 MEX3DQ86XN8 651 aaKnown RBP2.85□□□□□ -1.95
USP48-215ENST00000534705 SYCE1Q8N0S2 351 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 PRELID2Q8N945 189 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 ASCC1Q8N9N2 400 aaKnown RBP2.85□□□□□ -1.95
USP48-215ENST00000534705 OR52B4Q8NGK2 314 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 OR6F1Q8NGZ6 308 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 RPLP0P6Q8NHW5 317 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 GANCQ8TET4 914 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 PIK3R3Q92569 461 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 FCGR1BQ92637 280 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 PROX1Q92786 737 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 NT5C3BQ969T7 300 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 C11orf24Q96F05 449 aaPredicted RBP2.85□□□□□ -1.95
USP48-215ENST00000534705 NRBF2Q96F24 287 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 DCUN1D1Q96GG9 259 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 SH3YL1Q96HL8 342 aaPredicted RBP2.85□□□□□ -1.95
USP48-215ENST00000534705 PSMB7Q99436 277 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 P2RY13Q9BPV8 354 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 BCL7BQ9BQE9 202 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 YTHDF1Q9BYJ9 559 aaKnown RBP2.85□□□□□ -1.95
USP48-215ENST00000534705 ANKRD60Q9BZ19 345 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 LHX5Q9H2C1 402 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 VCX2Q9H322 139 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 OR51B5Q9H339 312 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 CDC42EP4Q9H3Q1 356 aaKnown RBP2.85□□□□□ -1.95
USP48-215ENST00000534705 LRRC19Q9H756 370 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 NEK6Q9HC98 313 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 SLCO1B3Q9NPD5 702 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 ZDHHC4Q9NPG8 344 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 GLRX2Q9NS18 164 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 GPR173Q9NS66 373 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 ABCC13Q9NSE7 274 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 PIGVQ9NUD9 493 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 ACOXLQ9NUZ1 547 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 SLC39A1Q9NY26 324 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 NUDT4Q9NZJ9 180 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 HACD3Q9P035 362 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 TXNDC16Q9P2K2 825 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 TEKT2Q9UIF3 430 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 PSME2Q9UL46 239 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 MMP17Q9ULZ9 603 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 DIMT1Q9UNQ2 313 aaKnown RBP2.85□□□□□ -1.95
USP48-215ENST00000534705 MOB4Q9Y3A3 225 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 SELENOKQ9Y6D0 94 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 CROCCQ5TZA2 2017 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 FRYQ5TBA9 3013 aa2.85□□□□□ -1.95
USP48-215ENST00000534705 ASPMQ8IZT6 3477 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 KMT2BQ9UMN6 2715 aaPredicted RBP2.84□□□□□ -1.95
USP48-215ENST00000534705 A0A087WXM4 84 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 A0A0G2JMP0 313 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 A0A0U1RQS6 177 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 A0A0X1KG70 313 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 A0A1W2PPR1 153 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 MAGEB16A2A368 324 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 LINC00862A6NCI5 91 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 SMIM23A6NLE4 172 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 WASH3PC4AMC7 463 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 CLDN25C9JDP6 229 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 NEDD8-MDP1E9PL57 170 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 H7C0C1 242 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 K7EQM0 130 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 TOR1AO14656 332 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 FPGTO14772 594 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 TM9SF1O15321 606 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 HDAC3O15379 428 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 SPOPO43791 374 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 ACSL4O60488 711 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 VPS26AO75436 327 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 WBP4O75554 376 aaKnown RBP2.84□□□□□ -1.95
USP48-215ENST00000534705 CLPXO76031 633 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 KRT3P12035 628 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 CYP11B1P15538 503 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 RPA2P15927 270 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 FUT1P19526 365 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 BCKDHBP21953 392 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 ELAVL4P26378 380 aaKnown RBP2.84□□□□□ -1.95
USP48-215ENST00000534705 SHC1P29353 583 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 RBMS1P29558 406 aaKnown RBP2.84□□□□□ -1.95
USP48-215ENST00000534705 EVI2BP34910 448 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 DDOSTP39656 456 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 PTGER3P43115 390 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 MAGEB1P43366 347 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 TNFRSF4P43489 277 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 ETV1P50549 477 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 METAP1P53582 386 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 PRRX1P54821 245 aa2.84□□□□□ -1.95
USP48-215ENST00000534705 TNFRSF17Q02223 184 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms