RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 FAM76AQ8TAV0 307 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 C22orf15Q8WYQ4 148 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 TADA1Q96BN2 335 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 RAB39BQ96DA2 213 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 GMPPAQ96IJ6 420 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 ZNF641Q96N77 438 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 ASCL2Q99929 193 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 HOXD1Q9GZZ0 328 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 WDR54Q9H977 334 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 LIN28AQ9H9Z2 209 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 KCNK13Q9HB14 408 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 NTN4Q9HB63 628 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 C3orf14Q9HBI5 128 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 ATAD3AQ9NVI7 634 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 INTS10Q9NVR2 710 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 TAS2R3Q9NYW6 316 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 COPS7AQ9UBW8 275 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 PPP1R3CQ9UQK1 317 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 AP1M2Q9Y6Q5 423 aa3.65□□□□□ -1.83
ECHDC1-223ENST00000534442 DOCK4Q8N1I0 1966 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 LRP5LA4QPB2 252 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 LY6G6CO95867 125 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 IGLV3-25P01717 112 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 GABRA1P14867 456 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 FUT1P19526 365 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 GIFP27352 417 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 PRDX6P30041 224 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 IL2RGP31785 369 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 OPRM1P35372 400 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 PRPHP41219 470 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 SLC6A12P48065 614 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 GEMP55040 296 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 POLR2FP61218 127 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 GNA12Q03113 381 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 IL17AQ16552 155 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 WLSQ5T9L3 541 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 SYPL2Q5VXT5 272 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 SPOPLQ6IQ16 392 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 FIP1L1Q6UN15 594 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 C17orf64Q86WR6 236 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 TEX9Q8N6V9 391 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 SIGLECL1Q8N7X8 197 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 DDHD1Q8NEL9 900 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 C8orf46Q8TAG6 207 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 MRGPRDQ8TDS7 321 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 KCTD4Q8WVF5 259 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 P3H4Q92791 437 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 LRRC58Q96CX6 371 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 LRR1Q96L50 414 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 C1orf147Q96MC9 270 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 RCHY1Q96PM5 261 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 ZNF300Q96RE9 604 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 FUNDC2Q9BWH2 189 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 EGLN1Q9GZT9 426 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 WWP1Q9H0M0 922 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 SLC26A1Q9H2B4 701 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 ASB8Q9H765 288 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 S100A14Q9HCY8 104 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 SCRT2Q9NQ03 307 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 PLCXD1Q9NUJ7 323 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 TXLNGQ9NUQ3 528 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 CNOT2Q9NZN8 540 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 MRTO4Q9UKD2 239 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 NXT1Q9UKK6 140 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 HPCAL4Q9UM19 191 aa3.64□□□□□ -1.83
ECHDC1-223ENST00000534442 LOC105371242A0A075B767 164 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 MEIOCA2RUB1 952 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 E9PQ18 207 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 GOLGA8SH3BPF8 625 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 EEF2KO00418 725 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 PES1O00541 588 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 CHEK1O14757 476 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 OR2B3O76000 313 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 ZFAND5O76080 213 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 CD8AP01732 235 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 CSF3P09919 207 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 INAFM2P0DMQ5 153 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 HPDP32754 393 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 GPR1P46091 355 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 CASP4P49662 377 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 FHITP49789 147 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 GMFBP60983 142 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 SSTP61278 116 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 RHOAP61586 193 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 HSPA14Q0VDF9 509 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 HNRNPA0Q13151 305 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 EXOSC7Q15024 291 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 PGGHGQ32M88 737 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 GPAT3Q53EU6 434 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 BEX5Q5H9J7 111 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 PMF1Q6P1K2 205 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 BNIPLQ7Z465 357 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 OR6M1Q8NGM8 313 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 OR4F5Q8NH21 305 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 UBA3Q8TBC4 463 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 CXorf40BQ96DE9 158 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 LITAFQ99732 161 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 OVOL2Q9BRP0 275 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 CLEC7AQ9BXN2 247 aa3.63□□□□□ -1.83
ECHDC1-223ENST00000534442 NGBQ9NPG2 151 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms