RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SHOX2O60902 331 aaPredicted RBP9.1□□□□□ -0.95
CAPN1-225ENST00000533704 CH25HO95992 272 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 CRYAAP02489 173 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 C8BP07358 591 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 ADORA3P0DMS8 318 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 UMPSP11172 480 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 TNFRSF1BP20333 461 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 CD247P20963 164 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 APOBEC3AP31941 199 aaPredicted RBP9.1□□□□□ -0.95
CAPN1-225ENST00000533704 IDH3GP51553 393 aaPredicted RBP9.1□□□□□ -0.95
CAPN1-225ENST00000533704 CHRNB3Q05901 458 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 PUDPQ08623 228 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 NPRL3Q12980 569 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 CAMK2DQ13557 499 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 PHYHD1Q5SRE7 291 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 C11orf71Q6IPW1 123 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 ZNF544Q6NX49 715 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 TTC33Q6PID6 262 aaPredicted RBP9.1□□□□□ -0.95
CAPN1-225ENST00000533704 WDR88Q6ZMY6 472 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 CARM1Q86X55 608 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 TMEM123Q8N131 208 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 SCAIQ8N9R8 606 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 ADPRHL1Q8NDY3 354 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 OR6N1Q8NGY5 312 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 OR5J2Q8NH18 312 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 ADAMTS16Q8TE57 1224 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 PROX1Q92786 737 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 ZNF837Q96EG3 531 aaPredicted RBP9.1□□□□□ -0.95
CAPN1-225ENST00000533704 SLC41A3Q96GZ6 507 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 TXNDC15Q96J42 360 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 RHNO1Q9BSD3 238 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 GRIP2Q9C0E4 1043 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 NELFAQ9H3P2 528 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 SEC61A2Q9H9S3 476 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 B3GAT2Q9NPZ5 323 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 SAR1AQ9NR31 198 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 MRPL39Q9NYK5 338 aaKnown RBP9.1□□□□□ -0.95
CAPN1-225ENST00000533704 USP22Q9UPT9 525 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 NOX1Q9Y5S8 564 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 CAPN7Q9Y6W3 813 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 PMF1-BGLAPU3KQ54 211 aa9.1□□□□□ -0.95
CAPN1-225ENST00000533704 ARPC4-TTLL3A0A0A6YYG9 625 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 SLC35F4A4IF30 521 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 TRAPPC13A5PLN9 417 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 BBIP1A8MTZ0 92 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 FXYD1O00168 92 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 PLPP3O14495 311 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 FZD7O75084 574 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 TP53P04637 393 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-225ENST00000533704 HIST1H2ABP04908 130 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 CELA3BP08861 270 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 CECR9P0C854 216 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 BMP4P12644 408 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 GZMMP51124 257 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 BIDP55957 195 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 LRRC23Q53EV4 343 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-225ENST00000533704 C1QTNF12Q5T7M4 302 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 CLEC2AQ6UVW9 174 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 ZNF813Q6ZN06 617 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 DEF8Q6ZN54 512 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 HIST3H2AQ7L7L0 130 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 TSPYL5Q86VY4 417 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-225ENST00000533704 C20orf196Q8IYI0 205 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 POU5F2Q8N7G0 328 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 PCYOX1LQ8NBM8 494 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 OR8J3Q8NGG0 315 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 OR6S1Q8NH40 331 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 MAGEE2Q8TD90 523 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-225ENST00000533704 RASSF5Q8WWW0 418 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 HIST1H2ACQ93077 130 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 ULBP2Q9BZM5 246 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 MRGBPQ9NV56 204 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 GID8Q9NWU2 228 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 ARMCX1Q9P291 453 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 POFUT2Q9Y2G5 429 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 SH3GLB1Q9Y371 365 aa9.09□□□□□ -0.95
CAPN1-225ENST00000533704 IGHV4-30-2A0A087WSY4 118 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 LOC102725191A0A1B0GVB3 256 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 ZNF503-AS2A6NEH8 195 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 ZNF99A8MXY4 864 aaPredicted RBP9.08□□□□□ -0.96
CAPN1-225ENST00000533704 RPL36A-HNRNPH2H7BZ11 118 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 RNF13O43567 381 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 LY6HO94772 140 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 LYPD3O95274 346 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 MT-ATP6P00846 226 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 HLA-HP01893 362 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 THY1P04216 161 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 CD79AP11912 226 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 IFNGR1P15260 489 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 B4GALT1P15291 398 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 CALCRP30988 508 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 CSNK1A1P48729 337 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 TAS2R41P59536 307 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 SNRPD2P62316 118 aaKnown RBP9.08□□□□□ -0.96
CAPN1-225ENST00000533704 NAAAQ02083 359 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 PIGFQ07326 219 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 CARTPTQ16568 116 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 ZNF74Q16587 644 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 KRTAP21-3Q3LHN1 58 aa9.08□□□□□ -0.96
CAPN1-225ENST00000533704 COQ5Q5HYK3 327 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms