RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 IL12BP29460 328 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 SHISA6Q6ZSJ9 500 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 LANCL3Q6ZV70 420 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 CDC20BQ86Y33 519 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 ASCC1Q8N9N2 400 aaKnown RBP13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 MESP1Q9BRJ9 268 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 VN1R1Q9GZP7 353 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 WWTR1Q9GZV5 400 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 SYT4Q9H2B2 425 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 MRTO4Q9UKD2 239 aaKnown RBP13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 MKL2Q9ULH7 1088 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 MOKQ9UQ07 419 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 SLC6A5Q9Y345 797 aa13.91□□□□□ -0.18
CACNA1E-208ENST00000533229 WDFY3Q8IZQ1 3526 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 TRAV6A0A075B6T7 132 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 A0A0A6YYJ9 748 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 SMLR1H3BR10 107 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 NDUFB5O43674 189 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 BGLAPP02818 100 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 ANKRD34CP0C6C1 535 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 FBLP22087 321 aaKnown RBP13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 ABCD3P28288 659 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 CLDN12P56749 244 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 YIF1BQ5BJH7 314 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 BCL2L15Q5TBC7 163 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 FAM199XQ6PEV8 388 aaPredicted RBP13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 PLXDC1Q8IUK5 500 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 SIAH3Q8IW03 269 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 CMTM4Q8IZR5 234 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 ZNF433Q8N7K0 673 aaPredicted RBP13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 ZNF671Q8TAW3 534 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 NDEL1Q9GZM8 345 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 ING1Q9UK53 422 aaPredicted RBP13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 SPAG17Q6Q759 2223 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 IFITM5A6NNB3 132 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 ALG1L2C9J202 215 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 C11orf98E9PRG8 122 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 NUDT14O95848 222 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 CXCR1P25024 350 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 PLCXD2Q0VAA5 305 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 DPY19L4Q7Z388 723 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 SDR16C5Q8N3Y7 309 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 TOMM5Q8N4H5 51 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 OR1N1Q8NGS0 311 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 GCDHQ92947 438 aaPredicted RBP13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 OMA1Q96E52 524 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 MRPL48Q96GC5 212 aaKnown RBP13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 SLC41A2Q96JW4 573 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 DPYSL5Q9BPU6 564 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 AUNIPQ9H7T9 357 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 FKRPQ9H9S5 495 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 C12orf10Q9HB07 376 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 NUDT15Q9NV35 164 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 CTSFQ9UBX1 484 aa13.9□□□□□ -0.18
CACNA1E-208ENST00000533229 TO15178 435 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 ARHGEF9O43307 516 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 TRIM3O75382 744 aaPredicted RBP13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 SLC6A8P48029 635 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 DCAF7P61962 342 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 FAPQ12884 760 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 EMC4Q5J8M3 183 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 ARHGAP40Q5TG30 622 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 HLA-DQA1Q5Y7H0 255 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 SLC6A19Q695T7 634 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 TIGD3Q6B0B8 471 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 KANSL1Q7Z3B3 1105 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 PM20D2Q8IYS1 436 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 PHYHIPQ92561 330 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 DAZLQ92904 295 aaKnown RBP13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 ZNF501Q96CX3 271 aaPredicted RBP13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 SLC25A38Q96DW6 304 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 AMELYQ99218 206 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 NUDT22Q9BRQ3 303 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 PTDSS2Q9BVG9 487 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 PCED1AQ9H1Q7 454 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 CAMK2AQ9UQM7 478 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 EML5Q05BV3 1969 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 ALPK2Q86TB3 2170 aa13.89□□□□□ -0.19
CACNA1E-208ENST00000533229 IGHV3-20A0A0C4DH32 117 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 AIPO00170 330 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 DUX1O43812 170 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 SCO2O43819 266 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 PLGP00747 810 aaPredicted RBP13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 HIST1H2ABP04908 130 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 GLB1P16278 677 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 PRKCAP17252 672 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 DPP4P27487 766 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 GZMKP49863 264 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 CCR6P51684 374 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 BTG1P62324 171 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 ALKBH1Q13686 389 aaKnown RBP13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 EEF1A1P5Q5VTE0 462 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 C16orf47Q6ZP98 133 aaPredicted RBP13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 FCRLAQ7L513 359 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 HIST3H2AQ7L7L0 130 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 NUP54Q7Z3B4 507 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 ZNF441Q8N8Z8 693 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 OR6N2Q8NGY6 317 aa13.88□□□□□ -0.19
CACNA1E-208ENST00000533229 OR2T4Q8NH00 348 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms