RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 PDE5AO76074 875 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 DIRAS1O95057 198 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 IFI30P13284 250 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 MAKP20794 623 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 TGFBR3Q03167 851 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 DGCR6Q14129 220 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 BEX5Q5H9J7 111 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 FBXW10Q5XX13 1052 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 CYP2R1Q6VVX0 501 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 MBOAT2Q6ZWT7 520 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 ABHD12BQ7Z5M8 362 aaPredicted RBP17.45■□□□□ 0.38
CPSF1-209ENST00000532725 WDR31Q8NA23 367 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 ANKK1Q8NFD2 765 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 SLC7A13Q8TCU3 470 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 CLPTM1LQ96KA5 538 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 LRR1Q96L50 414 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 THTPAQ9BU02 230 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 MUC13Q9H3R2 512 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 LIME1Q9H400 295 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 IL1RAPQ9NPH3 570 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 ROS1P08922 2347 aa17.45■□□□□ 0.38
CPSF1-209ENST00000532725 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-209ENST00000532725 RNF13O43567 381 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 AKAP8O43823 692 aaKnown RBP17.44■□□□□ 0.38
CPSF1-209ENST00000532725 H1F0P07305 194 aaKnown RBP17.44■□□□□ 0.38
CPSF1-209ENST00000532725 IFNGR1P15260 489 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 ITGA2P17301 1181 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 ATP6V1B2P21281 511 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 RPL18Q07020 188 aaKnown RBP17.44■□□□□ 0.38
CPSF1-209ENST00000532725 LAPTM4AQ15012 233 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 PPA1Q15181 289 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 STK11Q15831 433 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 PHYHD1Q5SRE7 291 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 ALKBH2Q6NS38 261 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 PODNL1Q6PEZ8 512 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 ZNF730Q6ZMV8 503 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 SLC35D2Q76EJ3 337 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 SSX8Q7RTT4 187 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 NANOGNBQ7Z5D8 188 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 DHFR2Q86XF0 187 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 C20orf196Q8IYI0 205 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 C1orf162Q8NEQ5 155 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-209ENST00000532725 MUCL1Q96DR8 90 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 DHRS1Q96LJ7 313 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 HS3ST6Q96QI5 342 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 PIP5K1AQ99755 562 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 SLC25A15Q9Y619 301 aa17.44■□□□□ 0.38
CPSF1-209ENST00000532725 TCRBV5S2A0A599 114 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 ZNF726A6NNF4 738 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 ZNF587BE7ETH6 402 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 SERPINI2O75830 405 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 AQP2P41181 271 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 BNIP1Q12981 228 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 FHL1Q13642 323 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 MTX3Q5HYI7 312 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 LCN8Q6JVE9 175 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 PGM2L1Q6PCE3 622 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 OR6X1Q8NH79 312 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 MCUR1Q96AQ8 359 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 ZNF837Q96EG3 531 aaPredicted RBP17.43■□□□□ 0.38
CPSF1-209ENST00000532725 PLPPR2Q96GM1 343 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 ALKBH3Q96Q83 286 aaPredicted RBP17.43■□□□□ 0.38
CPSF1-209ENST00000532725 BTBD10Q9BSF8 475 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 FUZQ9BT04 418 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 GPR35Q9HC97 309 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 NGBQ9NPG2 151 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 SLC17A5Q9NRA2 495 aa17.43■□□□□ 0.38
CPSF1-209ENST00000532725 CCDC168Q8NDH2 2452 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 ACOT8O14734 319 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 GYG2O15488 501 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 CDH2P19022 906 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-209ENST00000532725 NR1H2P55055 460 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 BIDP55957 195 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 ROR2Q01974 943 aaKnown RBP17.42■□□□□ 0.38
CPSF1-209ENST00000532725 CAMK2DQ13557 499 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 NCMAPQ5T1S8 102 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 CARD17Q5XLA6 110 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 HMBOX1Q6NT76 420 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 TMPRSS11FQ6ZWK6 438 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 PIWIL3Q7Z3Z3 882 aaKnown RBP17.42■□□□□ 0.38
CPSF1-209ENST00000532725 MEX3DQ86XN8 651 aaKnown RBP17.42■□□□□ 0.38
CPSF1-209ENST00000532725 GPR137CQ8N3F9 429 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 C17orf78Q8N4C9 275 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 OR1K1Q8NGR3 316 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 OR52N5Q8NH56 324 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 MOSPD2Q8NHP6 518 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 BCL2L2Q92843 193 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-209ENST00000532725 ASB9Q96DX5 294 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 ADAD1Q96M93 576 aaKnown RBP17.42■□□□□ 0.38
CPSF1-209ENST00000532725 TMEM204Q9BSN7 226 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 HIF3AQ9Y2N7 669 aa17.42■□□□□ 0.38
CPSF1-209ENST00000532725 CADP27708 2225 aa17.41■□□□□ 0.38
CPSF1-209ENST00000532725 ANKRD17O75179 2603 aaKnown RBP17.41■□□□□ 0.38
CPSF1-209ENST00000532725 TRBV4-1A0A0J9YWV2 114 aa17.41■□□□□ 0.38
CPSF1-209ENST00000532725 A0A1W2PR80 420 aa17.41■□□□□ 0.38
CPSF1-209ENST00000532725 DPRXA6NFQ7 191 aa17.41■□□□□ 0.38
CPSF1-209ENST00000532725 M0R3G1 203 aa17.41■□□□□ 0.38
CPSF1-209ENST00000532725 F13BP05160 661 aa17.41■□□□□ 0.38
CPSF1-209ENST00000532725 FABP3P05413 133 aa17.41■□□□□ 0.38
CPSF1-209ENST00000532725 RPS4XP62701 263 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms